Protein : Qrob_P0358600.2 Q. robur
Protein Identifier  ? Qrob_P0358600.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) KOG0794//KOG0834//KOG0835 - CDK8 kinase-activating protein cyclin C [Transcription]. // CDK9 kinase-activating protein cyclin T [Cell cycle control cell division chromosome partitioning]. // Cyclin L [General function prediction only]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 441  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.
GO:0019901 protein kinase binding Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103492172 1 423 + 423 Gaps:21 93.00 443 73.06 0.0 cyclin-L1-1
blastp_kegg lcl|csv:101207220 1 422 + 422 Gaps:21 92.78 443 72.99 0.0 cyclin-L1-1-like
blastp_kegg lcl|vvi:100241975 1 422 + 422 Gaps:33 92.46 451 74.10 0.0 cyclin-L1-1-like
blastp_kegg lcl|cit:102614657 1 362 + 362 Gaps:24 78.65 445 78.86 0.0 cyclin-L1-1-like
blastp_kegg lcl|pxb:103934016 1 365 + 365 Gaps:21 79.37 446 77.68 0.0 cyclin-L1-1-like
blastp_kegg lcl|pxb:103928350 1 365 + 365 Gaps:21 79.37 446 77.68 0.0 cyclin-L1-1-like
blastp_kegg lcl|mdm:103434000 1 365 + 365 Gaps:21 79.37 446 77.40 0.0 cyclin-L1-1
blastp_kegg lcl|sot:102586704 1 418 + 418 Gaps:31 93.19 426 70.78 0.0 cyclin-L1-1-like
blastp_kegg lcl|rcu:RCOM_0714000 1 417 + 417 Gaps:25 90.13 446 74.38 0.0 Cyclin-L2 putative
blastp_kegg lcl|gmx:100815690 1 359 + 359 Gaps:22 77.90 448 76.79 0.0 cyclin-L1-1-like
blastp_pdb 2i53_A 9 260 + 252 Gaps:35 93.41 258 31.95 8e-26 mol:protein length:258 Cyclin K
blastp_pdb 2w2h_B 9 238 + 230 Gaps:22 81.82 264 32.87 1e-24 mol:protein length:264 CYCLIN-T1
blastp_pdb 2w2h_A 9 238 + 230 Gaps:22 81.82 264 32.87 1e-24 mol:protein length:264 CYCLIN-T1
blastp_pdb 2pk2_D 9 238 + 230 Gaps:22 60.34 358 32.87 1e-24 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_C 9 238 + 230 Gaps:22 60.34 358 32.87 1e-24 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_B 9 238 + 230 Gaps:22 60.34 358 32.87 1e-24 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_A 9 238 + 230 Gaps:22 60.34 358 32.87 1e-24 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 3tni_B 9 253 + 245 Gaps:24 89.96 259 31.33 6e-24 mol:protein length:259 Cyclin-T1
blastp_pdb 3tnh_B 9 253 + 245 Gaps:24 89.96 259 31.33 6e-24 mol:protein length:259 Cyclin-T1
blastp_pdb 3mia_B 9 238 + 230 Gaps:22 81.20 266 32.41 9e-24 mol:protein length:266 Cyclin-T1
blastp_uniprot_sprot sp|Q8RWV3|CCL11_ARATH 1 420 + 420 Gaps:37 99.76 416 63.37 2e-172 Cyclin-L1-1 OS Arabidopsis thaliana GN CYCL1-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9AS36|CCL11_ORYSJ 1 417 + 417 Gaps:44 91.57 427 65.47 1e-156 Cyclin-L1-1 OS Oryza sativa subsp. japonica GN CYCL1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7ZVX0|CCNL1_DANRE 2 255 + 254 Gaps:24 48.19 498 47.92 5e-62 Cyclin-L1 OS Danio rerio GN ccnl1 PE 1 SV 1
blastp_uniprot_sprot sp|Q96S94|CCNL2_HUMAN 2 255 + 254 Gaps:21 46.35 520 46.06 5e-61 Cyclin-L2 OS Homo sapiens GN CCNL2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JJA7|CCNL2_MOUSE 2 255 + 254 Gaps:21 46.53 518 45.64 5e-61 Cyclin-L2 OS Mus musculus GN Ccnl2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5I0H5|CCNL2_RAT 2 255 + 254 Gaps:21 46.35 520 45.64 7e-61 Cyclin-L2 OS Rattus norvegicus GN Ccnl2 PE 2 SV 2
blastp_uniprot_sprot sp|Q6GN15|CCNL1_XENLA 2 335 + 334 Gaps:29 65.93 496 39.45 4e-60 Cyclin-L1 OS Xenopus laevis GN ccnl1 PE 2 SV 2
blastp_uniprot_sprot sp|Q5BKF8|CCNL2_XENTR 2 259 + 258 Gaps:25 49.30 497 44.90 1e-59 Cyclin-L2 OS Xenopus tropicalis GN ccnl2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZJP9|CCNL1_CHICK 2 255 + 254 Gaps:21 45.13 534 45.23 2e-59 Cyclin-L1 OS Gallus gallus GN CCNL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9R1Q2|CCNL1_RAT 2 261 + 260 Gaps:21 46.87 527 45.75 4e-57 Cyclin-L1 OS Rattus norvegicus GN Ccnl1 PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 4 161 158 SSF47954 none none IPR013763
Gene3D 5 197 193 G3DSA:1.10.472.10 none none IPR013763
PIRSF 1 422 422 PIRSF036580 none none IPR015429
PANTHER 65 420 356 PTHR10026 none none IPR015429
Coils 356 377 22 Coil none none none
PANTHER 2 49 48 PTHR10026 none none IPR015429
SMART 170 252 83 SM00385 none domain present in cyclins, TFIIB and Retinoblastoma IPR013763
SMART 54 157 104 SM00385 none domain present in cyclins, TFIIB and Retinoblastoma IPR013763
PANTHER 2 49 48 PTHR10026:SF13 none none none
PANTHER 65 420 356 PTHR10026:SF13 none none none
Pfam 54 161 108 PF00134 none Cyclin, N-terminal domain IPR006671
SUPERFAMILY 166 266 101 SSF47954 none none IPR013763

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting