Protein : Qrob_P0356690.2 Q. robur
Protein Identifier  ? Qrob_P0356690.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) K03537 - ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] Code Enzyme  EC:3.1.26.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 155  
Kegg Orthology  K03537
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008033 tRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
GO:0004540 ribonuclease activity Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_020284 1 154 + 154 none 100.00 154 79.22 2e-88 Ribonuclease P family protein / Rpp14 family protein isoform 1
blastp_kegg lcl|pop:POPTR_0015s00340g 1 154 + 154 none 100.00 154 81.17 2e-87 POPTRDRAFT_732716 hypothetical protein
blastp_kegg lcl|vvi:100257250 1 154 + 154 none 100.00 154 81.82 3e-86 probable ribonuclease P/MRP protein subunit POP5-like
blastp_kegg lcl|cit:102617032 1 154 + 154 none 100.00 154 76.62 9e-84 probable ribonuclease P/MRP protein subunit POP5-like
blastp_kegg lcl|cic:CICLE_v10006132mg 1 154 + 154 none 100.00 154 75.97 1e-82 hypothetical protein
blastp_kegg lcl|pop:POPTR_0015s00330g 1 154 + 154 none 100.00 154 77.92 2e-82 POPTRDRAFT_902180 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1528260 11 154 + 144 none 100.00 144 78.47 2e-78 lipoate-protein ligase B putative (EC:1.3.1.74)
blastp_kegg lcl|fve:101291764 1 154 + 154 none 100.00 154 72.73 1e-77 probable ribonuclease P/MRP protein subunit POP5-like
blastp_kegg lcl|sly:101249952 1 154 + 154 none 100.00 154 70.78 2e-77 probable ribonuclease P/MRP protein subunit POP5-like
blastp_kegg lcl|gmx:100779855 1 154 + 154 none 100.00 154 70.78 3e-77 probable ribonuclease P/MRP protein subunit POP5-like
blastp_uniprot_sprot sp|Q6AWV1|POP5_ARATH 1 154 + 154 Gaps:5 100.00 151 67.55 8e-68 Probable ribonuclease P/MRP protein subunit POP5 OS Arabidopsis thaliana GN EMB1687 PE 2 SV 1
blastp_uniprot_sprot sp|Q9UU90|POP5_SCHPO 1 117 + 117 Gaps:4 87.05 139 31.40 1e-13 Ribonucleases P/MRP protein subunit POP5 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC830.09c PE 3 SV 1
blastp_uniprot_sprot sp|Q54EP3|POP5_DICDI 1 117 + 117 Gaps:5 65.50 171 32.14 1e-12 Probable ribonuclease P/MRP protein subunit POP5 OS Dictyostelium discoideum GN pop5 PE 3 SV 1
blastp_uniprot_sprot sp|Q969H6|POP5_HUMAN 1 120 + 120 Gaps:11 73.01 163 31.09 8e-10 Ribonuclease P/MRP protein subunit POP5 OS Homo sapiens GN POP5 PE 1 SV 1
blastp_uniprot_sprot sp|Q1JQ92|POP5_BOVIN 1 119 + 119 Gaps:11 69.41 170 30.51 4e-09 Ribonuclease P/MRP protein subunit POP5 OS Bos taurus GN POP5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9DB28|POP5_MOUSE 1 119 + 119 Gaps:9 69.82 169 27.12 5e-08 Ribonuclease P/MRP protein subunit POP5 OS Mus musculus GN Pop5 PE 2 SV 1
rpsblast_cdd gnl|CDD|202035 7 117 + 111 Gaps:8 100.00 103 33.01 1e-22 pfam01900 RNase_P_Rpp14 Rpp14/Pop5 family. tRNA processing enzyme ribonuclease P (RNase P) consists of an RNA molecule associated with at least eight protein subunits hPop1 Rpp14 Rpp20 Rpp25 Rpp29 Rpp30 Rpp38 and Rpp40. This protein is known as Pop5 in eukaryotes.
rpsblast_cdd gnl|CDD|31560 5 117 + 113 Gaps:12 81.45 124 26.73 2e-07 COG1369 POP5 RNase P/RNase MRP subunit POP5 [Translation ribosomal structure and biogenesis].
rpsblast_kog gnl|CDD|39839 1 120 + 120 Gaps:7 74.68 154 37.39 1e-14 KOG4639 KOG4639 KOG4639 RNase P/RNase MRP subunit POP5 [Translation ribosomal structure and biogenesis].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 1 119 119 SSF160350 none none none
PANTHER 1 153 153 PTHR10993 none none none
Pfam 7 117 111 PF01900 none Rpp14/Pop5 family IPR002759

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting