Protein : Qrob_P0355690.2 Q. robur
Protein Identifier  ? Qrob_P0355690.2 Organism . Name  Quercus robur
Score  96.1 Score Type  egn
Protein Description  (M=2) PTHR10782:SF34 - E3 SUMO-PROTEIN LIGASE SIZ1 (PTHR10782:SF34) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 851  
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0016049 cell growth The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.
GO:0019789 SUMO transferase activity Catalysis of the transfer of SUMO from one protein to another via the reaction X-SUMO + Y --> Y-SUMO + X, where both X-SUMO and Y-SUMO are covalent linkages.
GO:0016925 protein sumoylation The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.
GO:0031668 cellular response to extracellular stimulus Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103324907 1 850 + 850 Gaps:89 91.46 878 76.09 0.0 E3 SUMO-protein ligase SIZ1
blastp_kegg lcl|pper:PRUPE_ppa001221mg 1 850 + 850 Gaps:89 91.46 878 75.72 0.0 hypothetical protein
blastp_kegg lcl|mdm:103447861 1 850 + 850 Gaps:90 91.45 877 75.56 0.0 E3 SUMO-protein ligase SIZ1
blastp_kegg lcl|tcc:TCM_041076 1 850 + 850 Gaps:85 91.44 876 74.78 0.0 DNA-binding protein with MIZ/SP-RING zinc finge isoform 1
blastp_kegg lcl|cmo:103501758 1 850 + 850 Gaps:87 91.46 878 72.85 0.0 E3 SUMO-protein ligase SIZ1
blastp_kegg lcl|fve:101309315 1 850 + 850 Gaps:91 91.48 880 73.04 0.0 E3 SUMO-protein ligase SIZ1-like
blastp_kegg lcl|csv:101224567 1 850 + 850 Gaps:94 91.37 869 72.54 0.0 E3 SUMO-protein ligase SIZ1-like
blastp_kegg lcl|csv:101214657 1 850 + 850 Gaps:94 91.37 869 72.54 0.0 E3 SUMO-protein ligase SIZ1-like
blastp_kegg lcl|cit:102614878 1 850 + 850 Gaps:87 91.48 880 71.55 0.0 E3 SUMO-protein ligase SIZ1-like
blastp_kegg lcl|rcu:RCOM_1400310 1 850 + 850 Gaps:89 91.44 876 75.03 0.0 sumo ligase putative
blastp_pdb 1wew_A 29 95 + 67 none 85.90 78 65.67 1e-27 mol:protein length:78 DNA-binding family protein
blastp_pdb 3i2d_A 131 401 + 271 Gaps:69 62.53 371 25.86 7e-08 mol:protein length:371 E3 SUMO-protein ligase SIZ1
blastp_uniprot_sprot sp|Q680Q4|SIZ1_ARATH 1 837 + 837 Gaps:93 88.69 884 64.16 0.0 E3 SUMO-protein ligase SIZ1 OS Arabidopsis thaliana GN SIZ1 PE 1 SV 2
blastp_uniprot_sprot sp|Q6L4L4|SIZ1_ORYSJ 1 850 + 850 Gaps:103 91.09 875 50.69 0.0 E3 SUMO-protein ligase SIZ1 OS Oryza sativa subsp. japonica GN SIZ1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6ASW7|SIZ2_ORYSJ 2 615 + 614 Gaps:53 70.97 813 50.78 0.0 E3 SUMO-protein ligase SIZ2 OS Oryza sativa subsp. japonica GN SIZ2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8NF64|ZMIZ2_HUMAN 131 438 + 308 Gaps:57 29.89 920 29.09 3e-15 Zinc finger MIZ domain-containing protein 2 OS Homo sapiens GN ZMIZ2 PE 1 SV 2
blastp_uniprot_sprot sp|Q8CIE2|ZMIZ2_MOUSE 131 438 + 308 Gaps:61 29.89 920 28.73 1e-14 Zinc finger MIZ domain-containing protein 2 OS Mus musculus GN Zmiz2 PE 2 SV 2
blastp_uniprot_sprot sp|Q6P1E1|ZMIZ1_MOUSE 138 357 + 220 Gaps:26 19.96 1072 28.04 1e-13 Zinc finger MIZ domain-containing protein 1 OS Mus musculus GN Zmiz1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ULJ6|ZMIZ1_HUMAN 138 357 + 220 Gaps:26 20.06 1067 28.04 1e-13 Zinc finger MIZ domain-containing protein 1 OS Homo sapiens GN ZMIZ1 PE 1 SV 3
blastp_uniprot_sprot sp|O94451|PLI1_SCHPO 207 348 + 142 Gaps:13 17.74 727 29.46 6e-12 E3 SUMO-protein ligase pli1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pli1 PE 1 SV 3
blastp_uniprot_sprot sp|Q94361|GEI17_CAEEL 216 345 + 130 Gaps:11 15.51 780 28.93 3e-11 E3 SUMO-protein ligase gei-17 OS Caenorhabditis elegans GN gei-17 PE 1 SV 4
blastp_uniprot_sprot sp|O88907|PIAS1_MOUSE 219 410 + 192 Gaps:46 22.73 651 30.41 2e-10 E3 SUMO-protein ligase PIAS1 OS Mus musculus GN Pias1 PE 1 SV 2
rpsblast_cdd gnl|CDD|111745 284 333 + 50 none 100.00 50 44.00 1e-15 pfam02891 zf-MIZ MIZ/SP-RING zinc finger. This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation.
rpsblast_kog gnl|CDD|37380 271 769 + 499 Gaps:114 74.21 636 23.52 2e-15 KOG2169 KOG2169 KOG2169 Zn-finger transcription factor [Transcription].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 39 91 53 PF00628 none PHD-finger IPR019787
ProSiteProfiles 273 350 78 PS51044 "UniPathway:UPA00886" Zinc finger SP-RING-type profile. IPR004181
Pfam 284 332 49 PF02891 "UniPathway:UPA00886" MIZ/SP-RING zinc finger IPR004181
PANTHER 7 354 348 PTHR10782 none none none
PANTHER 805 831 27 PTHR10782 none none none
ProSitePatterns 40 90 51 PS01359 none Zinc finger PHD-type signature. IPR019786
PANTHER 7 354 348 PTHR10782:SF34 "UniPathway:UPA00886";signature_desc=E3 SUMO-PROTEIN LIGASE SIZ1 (PTHR10782:SF34) none IPR031141
PANTHER 388 773 386 PTHR10782:SF34 "UniPathway:UPA00886";signature_desc=E3 SUMO-PROTEIN LIGASE SIZ1 (PTHR10782:SF34) none IPR031141
PANTHER 805 831 27 PTHR10782:SF34 "UniPathway:UPA00886";signature_desc=E3 SUMO-PROTEIN LIGASE SIZ1 (PTHR10782:SF34) none IPR031141
PANTHER 388 773 386 PTHR10782 none none none
Gene3D 30 94 65 G3DSA:3.30.40.10 none none IPR013083
SUPERFAMILY 31 94 64 SSF57903 none none IPR011011
SMART 39 91 53 SM00249 none PHD zinc finger IPR001965

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting