Protein : Qrob_P0350500.2 Q. robur
Protein Identifier  ? Qrob_P0350500.2 Organism . Name  Quercus robur
Score  34.1 Score Type  egn
Protein Description  (M=4) KOG1341 - Na+/K+ transporter [Inorganic ion transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 536  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0008324 cation transmembrane transporter activity Enables the transfer of cation from one side of the membrane to the other.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_039581 6 535 + 530 Gaps:19 99.08 546 63.40 0.0 Sodium transporter hkt1-like protein putative
blastp_kegg lcl|pmum:103323590 1 535 + 535 Gaps:20 100.00 543 63.54 0.0 sodium transporter HKT1-like
blastp_kegg lcl|pop:POPTR_0018s13210g 31 535 + 505 Gaps:14 99.80 506 64.36 0.0 POPTRDRAFT_669794 sodium transporter family protein
blastp_kegg lcl|pper:PRUPE_ppa021550mg 31 535 + 505 Gaps:19 99.81 513 65.04 0.0 hypothetical protein
blastp_kegg lcl|mdm:103424759 1 535 + 535 Gaps:22 99.44 538 62.80 0.0 sodium transporter HKT1-like
blastp_kegg lcl|cit:102613260 14 535 + 522 Gaps:37 98.71 542 60.93 0.0 probable cation transporter HKT6-like
blastp_kegg lcl|pxb:103931616 1 535 + 535 Gaps:29 100.00 534 62.36 0.0 sodium transporter HKT1-like
blastp_kegg lcl|pxb:103931615 1 535 + 535 Gaps:29 100.00 534 62.36 0.0 sodium transporter HKT1-like
blastp_kegg lcl|vvi:100260789 6 535 + 530 Gaps:19 99.08 544 58.81 0.0 sodium transporter HKT1-like
blastp_kegg lcl|vvi:100248819 1 534 + 534 Gaps:22 99.82 551 56.73 0.0 sodium transporter HKT1-like
blastp_uniprot_sprot sp|Q84TI7|HKT1_ARATH 67 534 + 468 Gaps:20 90.91 506 58.04 8e-172 Sodium transporter HKT1 OS Arabidopsis thaliana GN HKT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6H501|HKT6_ORYSJ 9 534 + 526 Gaps:24 98.11 530 49.04 7e-155 Probable cation transporter HKT6 OS Oryza sativa subsp. japonica GN HKT6 PE 2 SV 1
blastp_uniprot_sprot sp|Q93XI5|HKT2_ORYSI 37 534 + 498 Gaps:13 94.15 530 46.69 6e-140 Cation transporter HKT2 OS Oryza sativa subsp. indica GN HKT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q0D9S3|HKT1_ORYSJ 13 534 + 522 Gaps:16 99.25 530 43.73 2e-136 Cation transporter HKT1 OS Oryza sativa subsp. japonica GN HKT1 PE 1 SV 1
blastp_uniprot_sprot sp|A2YGP9|HKT1_ORYSI 13 534 + 522 Gaps:16 99.25 530 43.73 2e-136 Cation transporter HKT1 OS Oryza sativa subsp. indica GN HKT1 PE 1 SV 2
blastp_uniprot_sprot sp|A2WNZ9|HKT8_ORYSI 32 534 + 503 Gaps:42 97.65 554 43.99 2e-136 Cation transporter HKT8 OS Oryza sativa subsp. indica GN HKT8 PE 2 SV 2
blastp_uniprot_sprot sp|Q0JNB6|HKT8_ORYSJ 32 534 + 503 Gaps:46 97.65 554 43.99 7e-135 Cation transporter HKT8 OS Oryza sativa subsp. japonica GN HKT8 PE 3 SV 1
blastp_uniprot_sprot sp|Q7XPF7|HKT7_ORYSJ 49 535 + 487 Gaps:15 97.20 500 49.38 2e-130 Probable cation transporter HKT7 OS Oryza sativa subsp. japonica GN HKT7 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XPF8|HKT4_ORYSJ 7 527 + 521 Gaps:7 94.20 552 41.73 5e-129 Cation transporter HKT4 OS Oryza sativa subsp. japonica GN HKT4 PE 1 SV 2
blastp_uniprot_sprot sp|Q8L4K5|HKT9_ORYSJ 10 521 + 512 Gaps:25 97.25 509 40.81 7e-107 Probable cation transporter HKT9 OS Oryza sativa subsp. japonica GN HKT9 PE 2 SV 1
rpsblast_cdd gnl|CDD|130009 7 534 + 528 Gaps:43 65.25 800 31.42 1e-85 TIGR00934 2a38euk potassium uptake protein Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins TrkA an NAD-binding protein and TrkE an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
rpsblast_cdd gnl|CDD|111294 185 526 + 342 Gaps:49 95.51 334 24.14 8e-32 pfam02386 TrkH Cation transport protein. This family consists of various cation transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J EC:3.6.1.34. These proteins are involved in active sodium up-take utilising ATP in the process. TrkH a member of the family from E. coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in E. coli.
rpsblast_cdd gnl|CDD|30517 186 526 + 341 Gaps:63 62.93 499 21.66 5e-13 COG0168 TrkG Trk-type K+ transport systems membrane components [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|162118 195 520 + 326 Gaps:67 74.10 390 22.84 9e-09 TIGR00933 2a38 potassium uptake protein TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins TrkA an NAD-binding protein and TrkE an ATP-binding protein. This complex forms the potassium uptake system.
rpsblast_kog gnl|CDD|36555 60 520 + 461 Gaps:50 55.15 854 28.45 4e-82 KOG1341 KOG1341 KOG1341 Na+/K+ transporter [Inorganic ion transport and metabolism].

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 519 535 17 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 69 79 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 253 263 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 47 68 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 310 338 29 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 374 394 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 291 309 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 215 233 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 46 46 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 129 189 61 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 424 445 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 32 534 503 PTHR31064 none none none
Phobius 446 456 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 497 518 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 32 534 503 PTHR31064:SF1 none none none
Phobius 395 423 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 264 290 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 234 252 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 478 496 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 80 96 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 181 526 346 PF02386 none Cation transport protein IPR003445
Phobius 457 477 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 108 128 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 97 107 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 190 214 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 339 373 35 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

8 Localization

Analysis Start End Length
TMHMM 268 290 22
TMHMM 311 333 22
TMHMM 496 518 22
TMHMM 459 481 22
TMHMM 429 446 17
TMHMM 194 216 22
TMHMM 106 128 22
TMHMM 39 61 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting