Protein : Qrob_P0350440.2 Q. robur
Protein Identifier  ? Qrob_P0350440.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) KOG1341 - Na+/K+ transporter [Inorganic ion transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 398  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0008324 cation transmembrane transporter activity Enables the transfer of cation from one side of the membrane to the other.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_039581 1 397 + 397 Gaps:14 74.18 546 59.75 4e-148 Sodium transporter hkt1-like protein putative
blastp_kegg lcl|pmum:103323590 1 397 + 397 Gaps:19 74.03 543 60.70 9e-143 sodium transporter HKT1-like
blastp_kegg lcl|pop:POPTR_0018s13210g 26 397 + 372 Gaps:11 71.74 506 64.74 5e-138 POPTRDRAFT_669794 sodium transporter family protein
blastp_kegg lcl|vvi:100260789 1 397 + 397 Gaps:15 74.26 544 59.16 2e-137 sodium transporter HKT1-like
blastp_kegg lcl|pxb:103938403 1 397 + 397 Gaps:22 100.00 391 62.15 2e-136 sodium transporter HKT1-like
blastp_kegg lcl|pper:PRUPE_ppa021550mg 29 397 + 369 Gaps:21 71.73 513 63.32 2e-136 hypothetical protein
blastp_kegg lcl|cit:102613260 18 397 + 380 Gaps:24 72.32 542 57.65 3e-135 probable cation transporter HKT6-like
blastp_kegg lcl|mdm:103424759 1 397 + 397 Gaps:21 72.86 538 62.24 8e-135 sodium transporter HKT1-like
blastp_kegg lcl|vvi:100243683 15 397 + 383 Gaps:14 71.38 545 56.04 7e-131 sodium transporter HKT1-like
blastp_kegg lcl|vvi:100248819 15 397 + 383 Gaps:14 70.60 551 56.30 7e-131 sodium transporter HKT1-like
blastp_uniprot_sprot sp|Q84TI7|HKT1_ARATH 62 397 + 336 Gaps:21 62.65 506 56.15 9e-106 Sodium transporter HKT1 OS Arabidopsis thaliana GN HKT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q93XI5|HKT2_ORYSI 32 397 + 366 Gaps:13 67.74 530 47.35 5e-93 Cation transporter HKT2 OS Oryza sativa subsp. indica GN HKT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6H501|HKT6_ORYSJ 9 397 + 389 Gaps:29 72.45 530 46.61 1e-91 Probable cation transporter HKT6 OS Oryza sativa subsp. japonica GN HKT6 PE 2 SV 1
blastp_uniprot_sprot sp|Q0D9S3|HKT1_ORYSJ 2 397 + 396 Gaps:25 71.51 530 45.65 2e-91 Cation transporter HKT1 OS Oryza sativa subsp. japonica GN HKT1 PE 1 SV 1
blastp_uniprot_sprot sp|A2YGP9|HKT1_ORYSI 2 397 + 396 Gaps:25 71.51 530 45.65 2e-91 Cation transporter HKT1 OS Oryza sativa subsp. indica GN HKT1 PE 1 SV 2
blastp_uniprot_sprot sp|Q7XPF8|HKT4_ORYSJ 29 397 + 369 Gaps:8 65.40 552 41.55 6e-81 Cation transporter HKT4 OS Oryza sativa subsp. japonica GN HKT4 PE 1 SV 2
blastp_uniprot_sprot sp|A2WNZ9|HKT8_ORYSI 29 388 + 360 Gaps:29 70.22 554 41.39 5e-76 Cation transporter HKT8 OS Oryza sativa subsp. indica GN HKT8 PE 2 SV 2
blastp_uniprot_sprot sp|Q0JNB6|HKT8_ORYSJ 29 388 + 360 Gaps:29 70.22 554 41.13 1e-74 Cation transporter HKT8 OS Oryza sativa subsp. japonica GN HKT8 PE 3 SV 1
blastp_uniprot_sprot sp|Q8L4K5|HKT9_ORYSJ 33 397 + 365 Gaps:26 67.78 509 43.48 1e-71 Probable cation transporter HKT9 OS Oryza sativa subsp. japonica GN HKT9 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L481|HKT3_ORYSJ 33 397 + 365 Gaps:24 67.78 509 42.61 1e-70 Probable cation transporter HKT3 OS Oryza sativa subsp. japonica GN HKT3 PE 2 SV 1
rpsblast_cdd gnl|CDD|130009 32 397 + 366 Gaps:10 41.50 800 31.63 5e-54 TIGR00934 2a38euk potassium uptake protein Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins TrkA an NAD-binding protein and TrkE an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
rpsblast_cdd gnl|CDD|111294 185 397 + 213 Gaps:20 57.78 334 26.94 2e-21 pfam02386 TrkH Cation transport protein. This family consists of various cation transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J EC:3.6.1.34. These proteins are involved in active sodium up-take utilising ATP in the process. TrkH a member of the family from E. coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in E. coli.
rpsblast_kog gnl|CDD|36555 55 397 + 343 Gaps:24 38.99 854 28.83 5e-62 KOG1341 KOG1341 KOG1341 Na+/K+ transporter [Inorganic ion transport and metabolism].

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 92 102 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 42 63 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 316 342 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 33 397 365 PTHR31064:SF1 none none none
Phobius 195 219 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 33 397 365 PTHR31064 none none none
Phobius 269 295 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 64 74 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 379 396 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 103 123 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 343 378 36 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 124 194 71 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 187 397 211 PF02386 none Cation transport protein IPR003445
Phobius 220 268 49 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 296 315 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 41 41 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 75 91 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 397 397 1 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

6 Localization

Analysis Start End Length
TMHMM 199 221 22
TMHMM 379 396 17
TMHMM 273 295 22
TMHMM 34 56 22
TMHMM 101 123 22
TMHMM 316 338 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting