Protein : Qrob_P0348500.2 Q. robur
Protein Identifier  ? Qrob_P0348500.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11145 - TUMOR NECROSIS FACTOR-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 479  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0051260 protein homooligomerization The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103427616 1 478 + 478 Gaps:8 100.00 478 73.22 0.0 BTB/POZ domain-containing protein At3g09030-like
blastp_kegg lcl|fve:101293218 1 478 + 478 Gaps:8 100.00 474 73.00 0.0 BTB/POZ domain-containing protein At3g09030-like
blastp_kegg lcl|cam:101491835 13 478 + 466 Gaps:5 98.50 468 72.23 0.0 BTB/POZ domain-containing protein At3g09030-like
blastp_kegg lcl|pxb:103949463 1 478 + 478 Gaps:8 100.00 478 72.38 0.0 BTB/POZ domain-containing protein At3g09030-like
blastp_kegg lcl|pxb:103931180 1 478 + 478 Gaps:8 100.00 478 72.18 0.0 BTB/POZ domain-containing protein At3g09030-like
blastp_kegg lcl|mtr:MTR_7g088170 16 478 + 463 Gaps:7 96.65 478 71.00 0.0 SH3KBP1-binding protein
blastp_kegg lcl|mdm:103450604 1 478 + 478 Gaps:8 100.00 478 71.55 0.0 BTB/POZ domain-containing protein At3g09030
blastp_kegg lcl|pper:PRUPE_ppa005085mg 1 478 + 478 Gaps:8 100.00 478 72.38 0.0 hypothetical protein
blastp_kegg lcl|pmum:103338091 1 478 + 478 Gaps:8 100.00 478 72.59 0.0 BTB/POZ domain-containing protein At3g09030
blastp_kegg lcl|vvi:100242542 1 478 + 478 Gaps:7 100.00 475 71.37 0.0 BTB/POZ domain-containing protein At3g09030-like
blastp_uniprot_sprot sp|Q9S7R7|Y3903_ARATH 17 476 + 460 Gaps:12 97.83 460 65.33 0.0 BTB/POZ domain-containing protein At3g09030 OS Arabidopsis thaliana GN At3g09030 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FN67|Y5133_ARATH 12 468 + 457 Gaps:30 97.16 458 35.28 2e-72 BTB/POZ domain-containing protein At5g41330 OS Arabidopsis thaliana GN At5g41330 PE 2 SV 1
blastp_uniprot_sprot sp|O65555|Y4094_ARATH 15 361 + 347 Gaps:29 77.55 441 31.29 3e-27 BTB/POZ domain-containing protein At4g30940 OS Arabidopsis thaliana GN At4g30940 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUH1|Y2424_ARATH 16 468 + 453 Gaps:57 97.51 441 30.00 4e-22 BTB/POZ domain-containing protein At2g24240 OS Arabidopsis thaliana GN At2g24240 PE 2 SV 1
rpsblast_cdd gnl|CDD|202161 18 103 + 86 Gaps:6 93.48 92 31.40 1e-10 pfam02214 K_tetra K+ channel tetramerisation domain. The N-terminal cytoplasmic tetramerisation domain (T1) of voltage-gated K+ channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels. It is distantly related to the BTB/POZ domain pfam00651.
rpsblast_kog gnl|CDD|37925 12 475 + 464 Gaps:19 98.71 465 24.62 9e-95 KOG2714 KOG2714 KOG2714 SETA binding protein SB1 and related proteins contain BTB/POZ domain [General function prediction only].
rpsblast_kog gnl|CDD|37927 18 102 + 85 Gaps:12 36.96 230 35.29 6e-10 KOG2716 KOG2716 KOG2716 Polymerase delta-interacting protein PDIP1 and related proteins contain BTB/POZ domain [Inorganic ion transport and metabolism].
rpsblast_kog gnl|CDD|36878 9 113 + 105 Gaps:7 36.42 302 30.00 2e-09 KOG1665 KOG1665 KOG1665 AFH1-interacting protein FIP2 contains BTB/POZ domain and pentapeptide repeats [General function prediction only].
rpsblast_kog gnl|CDD|37934 15 113 + 99 Gaps:3 45.25 221 28.00 7e-09 KOG2723 KOG2723 KOG2723 Uncharacterized conserved protein contains BTB/POZ domain [General function prediction only].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 133 358 226 SSF50969 none none IPR011044
PANTHER 6 478 473 PTHR11145 none none none
Gene3D 15 105 91 G3DSA:3.30.710.10 none none none
SUPERFAMILY 15 106 92 SSF54695 none none IPR011333
Gene3D 286 351 66 G3DSA:2.140.10.10 none none IPR027295
Pfam 18 104 87 PF02214 none BTB/POZ domain IPR003131

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting