7 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005524 | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
GO:0005737 | cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
GO:0008152 | metabolic process | The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. |
GO:0016301 | kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
GO:0016773 | phosphotransferase activity, alcohol group as acceptor | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor). |
GO:0008299 | isoprenoid biosynthetic process | The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues. |
GO:0004496 | mevalonate kinase activity | Catalysis of the reaction: (R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP + 2 H(+). |
39 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pper:PRUPE_ppa006979mg | 1 | 387 | + | 387 | none | 100.00 | 387 | 83.20 | 0.0 | hypothetical protein |
blastp_kegg | lcl|pmum:103344655 | 1 | 387 | + | 387 | none | 100.00 | 387 | 83.20 | 0.0 | mevalonate kinase |
blastp_kegg | lcl|pxb:103940938 | 1 | 385 | + | 385 | none | 99.48 | 387 | 83.64 | 0.0 | mevalonate kinase |
blastp_kegg | lcl|mdm:103450949 | 1 | 386 | + | 386 | none | 99.74 | 387 | 82.90 | 0.0 | mevalonate kinase-like |
blastp_kegg | lcl|sly:101261961 | 1 | 385 | + | 385 | Gaps:2 | 97.70 | 392 | 79.37 | 0.0 | mevalonate kinase-like |
blastp_kegg | lcl|sot:102582697 | 1 | 385 | + | 385 | Gaps:2 | 96.96 | 395 | 78.85 | 0.0 | mevalonate kinase-like |
blastp_kegg | lcl|mdm:103433961 | 1 | 387 | + | 387 | none | 100.00 | 387 | 80.36 | 0.0 | mevalonate kinase-like |
blastp_kegg | lcl|fve:101299493 | 1 | 387 | + | 387 | none | 100.00 | 387 | 80.10 | 0.0 | mevalonate kinase-like |
blastp_kegg | lcl|pvu:PHAVU_006G092900g | 1 | 387 | + | 387 | none | 100.00 | 387 | 77.52 | 0.0 | hypothetical protein |
blastp_kegg | lcl|gmx:100820343 | 1 | 387 | + | 387 | none | 100.00 | 387 | 78.55 | 0.0 | mevalonate kinase-like |
blastp_pdb | 2r3v_D | 7 | 386 | + | 380 | Gaps:29 | 94.70 | 396 | 41.07 | 4e-74 | mol:protein length:396 Mevalonate kinase |
blastp_pdb | 2r3v_C | 7 | 386 | + | 380 | Gaps:29 | 94.70 | 396 | 41.07 | 4e-74 | mol:protein length:396 Mevalonate kinase |
blastp_pdb | 2r3v_B | 7 | 386 | + | 380 | Gaps:29 | 94.70 | 396 | 41.07 | 4e-74 | mol:protein length:396 Mevalonate kinase |
blastp_pdb | 2r3v_A | 7 | 386 | + | 380 | Gaps:29 | 94.70 | 396 | 41.07 | 4e-74 | mol:protein length:396 Mevalonate kinase |
blastp_pdb | 2r42_A | 7 | 378 | + | 372 | Gaps:31 | 92.91 | 395 | 40.05 | 1e-64 | mol:protein length:395 Mevalonate kinase |
blastp_pdb | 1kvk_A | 7 | 378 | + | 372 | Gaps:31 | 92.91 | 395 | 40.05 | 1e-64 | mol:protein length:395 mevalonate kinase |
blastp_pdb | 1vis_A | 1 | 346 | + | 346 | Gaps:64 | 88.89 | 324 | 30.21 | 2e-18 | mol:protein length:324 Mevalonate kinase |
blastp_pdb | 1kkh_A | 7 | 346 | + | 340 | Gaps:64 | 88.96 | 317 | 30.50 | 3e-18 | mol:protein length:317 Mevalonate Kinase |
blastp_pdb | 2hfu_B | 9 | 345 | + | 337 | Gaps:71 | 83.13 | 332 | 30.80 | 6e-17 | mol:protein length:332 Mevalonate kinase putative |
blastp_pdb | 2hfu_A | 9 | 345 | + | 337 | Gaps:71 | 83.13 | 332 | 30.80 | 6e-17 | mol:protein length:332 Mevalonate kinase putative |
blastp_uniprot_sprot | sp|P46086|KIME_ARATH | 1 | 383 | + | 383 | Gaps:9 | 100.00 | 378 | 73.28 | 0.0 | Mevalonate kinase OS Arabidopsis thaliana GN At5g27450 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q03426|KIME_HUMAN | 7 | 386 | + | 380 | Gaps:29 | 94.70 | 396 | 41.07 | 1e-73 | Mevalonate kinase OS Homo sapiens GN MVK PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q5E9T8|KIME_BOVIN | 7 | 386 | + | 380 | Gaps:29 | 94.70 | 396 | 38.93 | 2e-64 | Mevalonate kinase OS Bos taurus GN MVK PE 2 SV 1 |
blastp_uniprot_sprot | sp|P17256|KIME_RAT | 7 | 378 | + | 372 | Gaps:31 | 92.91 | 395 | 40.05 | 4e-64 | Mevalonate kinase OS Rattus norvegicus GN Mvk PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9R008|KIME_MOUSE | 7 | 378 | + | 372 | Gaps:31 | 92.91 | 395 | 40.05 | 3e-63 | Mevalonate kinase OS Mus musculus GN Mvk PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q86AG7|KIME_DICDI | 3 | 382 | + | 380 | Gaps:32 | 96.41 | 390 | 37.50 | 2e-60 | Mevalonate kinase OS Dictyostelium discoideum GN mvk PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q09780|KIME_SCHPO | 7 | 346 | + | 340 | Gaps:26 | 81.68 | 404 | 36.97 | 2e-45 | Putative mevalonate kinase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN erg12 PE 2 SV 1 |
blastp_uniprot_sprot | sp|P07277|KIME_YEAST | 7 | 378 | + | 372 | Gaps:35 | 87.36 | 443 | 30.49 | 3e-40 | Mevalonate kinase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ERG12 PE 1 SV 1 |
blastp_uniprot_sprot | sp|B6YST1|KIME_THEON | 1 | 347 | + | 347 | Gaps:59 | 89.82 | 334 | 36.00 | 7e-29 | Mevalonate kinase OS Thermococcus onnurineus (strain NA1) GN mvk PE 3 SV 1 |
blastp_uniprot_sprot | sp|Q5JJC6|KIME_THEKO | 2 | 347 | + | 346 | Gaps:49 | 88.72 | 337 | 35.79 | 8e-29 | Mevalonate kinase OS Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN mvk PE 3 SV 1 |
16 Domain Motifs
6 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2014_nLBD*_A4 | Qrob_Chr08 | 8 | v_12498_318 | v_12364_308 | 34,91 | 16,12 | 53,62 | lod | 2,4961 | 5,2 |
Bourran2_2014_rEpiBC*_A4 | Qrob_Chr08 | 8 | v_12498_318 | v_12364_308 | 35,77 | 14,11 | 55,31 | lod | 2,9413 | 6,2 |
Bourran_2000_2002_QTL6_Delta.F | Qrob_Chr03 | 3 | s_2HYXJ2_207 | s_1AUAXK_317 | 29.12 | 6,3 | 45,37 | lod | 3.1666 | 0.026 |
Bourran2_2014_nLBD_3P | Qrob_Chr03 | 3 | s_1ET7H8_604 | s_1BYNB5_834 | 23,73 | 0 | 46,72 | lod | 1,7573 | 3,8 |
PM_1999_QTL14_peak_Bud_burst_3P | Qrob_Chr03 | 3 | s_2F0SI1_756 | v_6056_735 | 11,78 | 3,78 | 50,78 | lod | 2,5 | 4,5 |
Bourran2_2014_rEpiBC*_3P | Qrob_Chr03 | 3 | s_1A3B3X_1163 | s_1DKGMO_450 | 23,04 | 4,92 | 41,12 | lod | 2,5668 | 7 |