Protein : Qrob_P0347690.2 Q. robur
Protein Identifier  ? Qrob_P0347690.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=1) K05758 - actin related protein 2/3 complex, subunit 2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 335  
Kegg Orthology  K05758
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005885 Arp2/3 protein complex A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments.
GO:0015629 actin cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
GO:0034314 Arp2/3 complex-mediated actin nucleation The actin nucleation process in which actin monomers combine to form a new branch on the side of an existing actin filament; mediated by the Arp2/3 protein complex and its interaction with other proteins.
GO:0030833 regulation of actin filament polymerization Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005960 1 334 + 334 Gaps:10 100.00 324 82.72 0.0 Actin-related protein 2/3 complex subunit 2 isoform 2
blastp_kegg lcl|vvi:100261170 1 334 + 334 Gaps:10 98.78 328 83.02 0.0 actin-related protein 2/3 complex subunit 2-like
blastp_kegg lcl|pper:PRUPE_ppa008051mg 1 328 + 328 Gaps:10 91.64 347 81.76 0.0 hypothetical protein
blastp_kegg lcl|pmum:103325551 1 332 + 332 Gaps:16 99.68 317 82.28 0.0 actin-related protein 2/3 complex subunit 2A
blastp_kegg lcl|cam:101492474 1 334 + 334 Gaps:10 100.00 324 79.94 0.0 actin-related protein 2/3 complex subunit 2-like
blastp_kegg lcl|pxb:103958087 1 332 + 332 Gaps:10 99.69 323 82.61 0.0 actin-related protein 2/3 complex subunit 2A
blastp_kegg lcl|pop:POPTR_0001s12450g 1 334 + 334 Gaps:10 100.00 324 80.86 0.0 POPTRDRAFT_640177 actin-related protein 2/3 complex 34kDa subunit
blastp_kegg lcl|gmx:100819020 1 334 + 334 Gaps:10 100.00 324 79.63 0.0 actin-related protein 2/3 complex subunit 2A-like
blastp_kegg lcl|pvu:PHAVU_003G274500g 1 334 + 334 Gaps:10 100.00 324 78.70 0.0 hypothetical protein
blastp_kegg lcl|cit:102619842 1 334 + 334 Gaps:13 100.00 327 77.06 0.0 actin-related protein 2/3 complex subunit 2A-like
blastp_pdb 3dwl_I 1 322 + 322 Gaps:36 99.68 317 31.65 1e-41 mol:protein length:317 Actin-related protein 2/3 complex subunit 2
blastp_pdb 3dwl_D 1 322 + 322 Gaps:36 99.68 317 31.65 1e-41 mol:protein length:317 Actin-related protein 2/3 complex subunit 2
blastp_pdb 3rse_D 1 320 + 320 Gaps:35 99.00 300 32.66 2e-38 mol:protein length:300 Actin-related protein 2/3 complex subunit 2
blastp_pdb 3dxm_D 1 320 + 320 Gaps:35 99.00 300 32.66 2e-38 mol:protein length:300 Actin-related protein 2/3 complex subunit 2
blastp_pdb 3dxk_D 1 320 + 320 Gaps:35 99.00 300 32.66 2e-38 mol:protein length:300 Actin-related protein 2/3 complex subunit 2
blastp_pdb 2p9u_D 1 320 + 320 Gaps:35 99.00 300 32.66 2e-38 mol:protein length:300 Actin-related protein 2/3 complex subunit 2
blastp_pdb 2p9s_D 1 320 + 320 Gaps:35 99.00 300 32.66 2e-38 mol:protein length:300 Actin-related protein 2/3 complex subunit 2
blastp_pdb 2p9p_D 1 320 + 320 Gaps:35 99.00 300 32.66 2e-38 mol:protein length:300 Actin-related protein 2/3 complex subunit 2
blastp_pdb 2p9n_D 1 320 + 320 Gaps:35 99.00 300 32.66 2e-38 mol:protein length:300 Actin-related protein 2/3 complex subunit 2
blastp_pdb 2p9l_D 1 320 + 320 Gaps:35 99.00 300 32.66 2e-38 mol:protein length:300 Actin-related protein 2/3 complex subunit 2
blastp_uniprot_sprot sp|Q8LGI3|ARC2A_ARATH 1 333 + 333 Gaps:17 100.00 318 74.84 1e-170 Actin-related protein 2/3 complex subunit 2A OS Arabidopsis thaliana GN ARPC2A PE 1 SV 1
blastp_uniprot_sprot sp|F4IVU1|ARC2B_ARATH 1 302 + 302 Gaps:13 77.81 374 37.46 7e-63 Actin-related protein 2/3 complex subunit 2B OS Arabidopsis thaliana GN ARPC2B PE 2 SV 1
blastp_uniprot_sprot sp|O96623|ARPC2_DICDI 1 322 + 322 Gaps:48 99.66 293 37.33 1e-44 Actin-related protein 2/3 complex subunit 2 OS Dictyostelium discoideum GN arcB PE 1 SV 1
blastp_uniprot_sprot sp|Q8WTM6|ARPC2_CAEEL 1 321 + 321 Gaps:32 99.34 301 32.44 8e-42 Probable actin-related protein 2/3 complex subunit 2 OS Caenorhabditis elegans GN arx-4 PE 3 SV 1
blastp_uniprot_sprot sp|O14241|ARPC2_SCHPO 1 322 + 322 Gaps:36 99.68 317 31.65 4e-41 Actin-related protein 2/3 complex subunit 2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN arc2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9VIM5|ARPC2_DROME 1 324 + 324 Gaps:35 100.00 301 33.22 2e-40 Actin-related protein 2/3 complex subunit 2 OS Drosophila melanogaster GN Arpc2 PE 2 SV 2
blastp_uniprot_sprot sp|Q5R5Z5|ARPC2_PONAB 1 320 + 320 Gaps:35 99.00 300 32.66 5e-38 Actin-related protein 2/3 complex subunit 2 OS Pongo abelii GN ARPC2 PE 2 SV 1
blastp_uniprot_sprot sp|O15144|ARPC2_HUMAN 1 320 + 320 Gaps:35 99.00 300 32.66 5e-38 Actin-related protein 2/3 complex subunit 2 OS Homo sapiens GN ARPC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q3MHR7|ARPC2_BOVIN 1 320 + 320 Gaps:35 99.00 300 32.66 7e-38 Actin-related protein 2/3 complex subunit 2 OS Bos taurus GN ARPC2 PE 1 SV 1
blastp_uniprot_sprot sp|P85970|ARPC2_RAT 1 320 + 320 Gaps:35 99.00 300 32.66 1e-37 Actin-related protein 2/3 complex subunit 2 OS Rattus norvegicus GN Arpc2 PE 1 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 149 306 158 G3DSA:3.30.1460.20 none none none
SUPERFAMILY 135 307 173 SSF69645 none none none
PANTHER 1 324 324 PTHR12058 none none IPR007188
Gene3D 1 139 139 G3DSA:3.30.1460.20 none none none
Pfam 74 309 236 PF04045 none Arp2/3 complex, 34 kD subunit p34-Arc IPR007188
SUPERFAMILY 1 129 129 SSF69645 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting