Protein : Qrob_P0345510.2 Q. robur
Protein Identifier  ? Qrob_P0345510.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR11178//PTHR11178:SF13 - IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 98  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005506 iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
GO:0051536 iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
GO:0016226 iron-sulfur cluster assembly The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0004s23140g 36 97 + 62 none 26.50 234 83.87 7e-25 nitrogen fixation NifU-like family protein
blastp_kegg lcl|tcc:TCM_006222 35 97 + 63 none 27.16 232 82.54 1e-24 NIFU-like protein 2 isoform 1
blastp_kegg lcl|cic:CICLE_v10002359mg 36 97 + 62 none 26.72 232 82.26 3e-24 hypothetical protein
blastp_kegg lcl|cit:102611562 36 97 + 62 none 26.72 232 82.26 3e-24 nifU-like protein 2 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1374380 36 97 + 62 none 27.43 226 82.26 3e-24 Nitrogen fixation protein nifU putative
blastp_kegg lcl|sot:102596224 36 97 + 62 none 24.41 254 82.26 3e-24 nifU-like protein 2 chloroplastic-like
blastp_kegg lcl|sly:101245296 36 97 + 62 none 24.60 252 82.26 4e-24 nifU-like protein 2 chloroplastic-like
blastp_kegg lcl|cmo:103488846 36 97 + 62 none 27.31 227 82.26 6e-24 nifU-like protein 2 chloroplastic
blastp_kegg lcl|mdm:103428978 36 97 + 62 none 25.62 242 80.65 8e-24 nifU-like protein 2 chloroplastic
blastp_kegg lcl|pxb:103944971 36 97 + 62 none 27.80 223 80.65 8e-24 nifU-like protein 2 chloroplastic
blastp_pdb 2z51_A 36 97 + 62 none 40.26 154 72.58 7e-24 mol:protein length:154 NifU-like protein 2 chloroplast
blastp_pdb 1th5_A 36 97 + 62 none 83.78 74 56.45 4e-17 mol:protein length:74 NifU1
blastp_uniprot_sprot sp|Q93W20|NIFU2_ARATH 36 97 + 62 none 26.38 235 72.58 1e-22 NifU-like protein 2 chloroplastic OS Arabidopsis thaliana GN NIFU2 PE 1 SV 1
blastp_uniprot_sprot sp|Q84RQ7|NIFU3_ARATH 36 97 + 62 none 26.27 236 59.68 2e-17 NifU-like protein 3 chloroplastic OS Arabidopsis thaliana GN NIFU3 PE 2 SV 1
blastp_uniprot_sprot sp|Q84LK7|NIFU1_ORYSJ 36 97 + 62 none 27.43 226 56.45 2e-15 NifU-like protein 1 chloroplastic OS Oryza sativa subsp. japonica GN NIFU1 PE 1 SV 1
rpsblast_kog gnl|CDD|37569 36 83 + 48 none 22.54 213 31.25 8e-07 KOG2358 KOG2358 KOG2358 NifU-like domain-containing proteins [Posttranslational modification protein turnover chaperones].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 36 91 56 PF01106 none NifU-like domain IPR001075
PANTHER 36 97 62 PTHR11178 none none none
SUPERFAMILY 35 95 61 SSF117916 none none none
PANTHER 36 97 62 PTHR11178:SF13 none none none
ProDom 37 97 61 PD002830 none NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING IPR001075

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting