Protein : Qrob_P0344310.2 Q. robur
Protein Identifier  ? Qrob_P0344310.2 Organism . Name  Quercus robur
Score  53.0 Score Type  egn
Protein Description  (M=2) K03233 - elongation factor EF-1 gamma subunit Gene Prediction Quality  validated
Protein length 

Sequence

Length: 821  
Kegg Orthology  K03233
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0003746 translation elongation factor activity Functions in chain elongation during polypeptide synthesis at the ribosome.
GO:0006414 translational elongation The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020303mg 1 820 + 820 Gaps:63 100.00 422 86.02 0.0 hypothetical protein
blastp_kegg lcl|cit:102621285 1 820 + 820 Gaps:63 100.00 422 85.78 0.0 elongation factor 1-gamma-like
blastp_kegg lcl|vvi:100264325 1 820 + 820 Gaps:63 100.00 423 86.29 0.0 elongation factor 1-gamma-like
blastp_kegg lcl|pper:PRUPE_ppa006233mg 1 820 + 820 Gaps:59 100.00 421 85.04 0.0 hypothetical protein
blastp_kegg lcl|pmum:103319315 1 820 + 820 Gaps:59 100.00 421 84.32 0.0 elongation factor 1-gamma-like
blastp_kegg lcl|vvi:100246571 1 820 + 820 Gaps:65 100.00 424 87.50 0.0 elongation factor 1-gamma-like
blastp_kegg lcl|obr:102720301 1 820 + 820 Gaps:65 100.00 418 84.21 0.0 elongation factor 1-gamma 2-like
blastp_kegg lcl|sita:101765436 1 820 + 820 Gaps:51 100.00 417 81.29 0.0 elongation factor 1-gamma 2-like
blastp_kegg lcl|zma:103654798 1 820 + 820 Gaps:57 100.00 414 82.13 0.0 elongation factor 1-gamma 2-like
blastp_kegg lcl|dosa:Os02t0220500-01 1 820 + 820 Gaps:57 100.00 414 85.75 0.0 Os02g0220500 EF1G ELONGATION_FACTOR_1_GAMMA-LIKE_PROTEIN Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma).
blastp_pdb 1pbu_A 255 820 + 566 Gaps:26 100.00 162 37.65 1e-24 mol:protein length:162 Elongation factor 1-gamma
blastp_pdb 1aw9_A 25 206 + 182 Gaps:16 86.11 216 30.65 1e-13 mol:protein length:216 GLUTATHIONE S-TRANSFERASE III
blastp_pdb 1bye_D 5 207 + 203 Gaps:15 96.71 213 27.18 3e-13 mol:protein length:213 PROTEIN (GLUTATHIONE S-TRANSFERASE)
blastp_pdb 1bye_C 5 207 + 203 Gaps:15 96.71 213 27.18 3e-13 mol:protein length:213 PROTEIN (GLUTATHIONE S-TRANSFERASE)
blastp_pdb 1bye_B 5 207 + 203 Gaps:15 96.71 213 27.18 3e-13 mol:protein length:213 PROTEIN (GLUTATHIONE S-TRANSFERASE)
blastp_pdb 1bye_A 5 207 + 203 Gaps:15 96.71 213 27.18 3e-13 mol:protein length:213 PROTEIN (GLUTATHIONE S-TRANSFERASE)
blastp_pdb 1axd_B 5 202 + 198 Gaps:15 96.17 209 27.36 5e-13 mol:protein length:209 GLUTATHIONE S-TRANSFERASE I
blastp_pdb 1axd_A 5 202 + 198 Gaps:15 96.17 209 27.36 5e-13 mol:protein length:209 GLUTATHIONE S-TRANSFERASE I
blastp_pdb 3m8n_D 17 163 + 147 Gaps:12 63.56 225 33.57 1e-09 mol:protein length:225 Possible glutathione S-transferase
blastp_pdb 3m8n_C 17 163 + 147 Gaps:12 63.56 225 33.57 1e-09 mol:protein length:225 Possible glutathione S-transferase
blastp_uniprot_sprot sp|Q6YW46|EF1G2_ORYSJ 1 820 + 820 Gaps:103 100.00 418 83.97 0.0 Elongation factor 1-gamma 2 OS Oryza sativa subsp. japonica GN Os02g0220500 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FUM1|EF1G_PRUAV 1 820 + 820 Gaps:61 100.00 422 79.38 0.0 Elongation factor 1-gamma OS Prunus avium PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZRI7|EF1G1_ORYSJ 1 820 + 820 Gaps:61 100.00 418 80.86 0.0 Elongation factor 1-gamma 1 OS Oryza sativa subsp. japonica GN Os02g0220600 PE 2 SV 1
blastp_uniprot_sprot sp|Q5Z627|EF1G3_ORYSJ 1 820 + 820 Gaps:49 100.00 416 77.64 0.0 Elongation factor 1-gamma 3 OS Oryza sativa subsp. japonica GN Os06g0571400 PE 2 SV 1
blastp_uniprot_sprot sp|O04487|EF1G1_ARATH 1 820 + 820 Gaps:51 100.00 414 77.78 0.0 Probable elongation factor 1-gamma 1 OS Arabidopsis thaliana GN At1g09640 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FVT2|EF1G2_ARATH 1 820 + 820 Gaps:59 100.00 413 77.72 0.0 Probable elongation factor 1-gamma 2 OS Arabidopsis thaliana GN At1g57720 PE 2 SV 1
blastp_uniprot_sprot sp|Q9D8N0|EF1G_MOUSE 2 820 + 819 Gaps:105 99.54 437 42.99 7e-83 Elongation factor 1-gamma OS Mus musculus GN Eef1g PE 1 SV 3
blastp_uniprot_sprot sp|Q68FR6|EF1G_RAT 2 820 + 819 Gaps:105 99.54 437 40.92 3e-82 Elongation factor 1-gamma OS Rattus norvegicus GN Eef1g PE 1 SV 3
blastp_uniprot_sprot sp|P29694|EF1G_RABIT 2 820 + 819 Gaps:107 99.54 437 43.68 4e-82 Elongation factor 1-gamma OS Oryctolagus cuniculus GN EEF1G PE 2 SV 3
blastp_uniprot_sprot sp|Q29387|EF1G_PIG 11 820 + 810 Gaps:107 100.00 432 43.29 8e-82 Elongation factor 1-gamma (Fragment) OS Sus scrofa GN EEF1G PE 2 SV 2

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 80 215 136 SSF47616 none none IPR010987
ProSiteProfiles 646 820 175 PS50040 none Elongation factor 1 (EF-1) gamma C-terminal domain profile. IPR001662
Gene3D 255 414 160 G3DSA:3.30.70.1010 none none IPR001662
Gene3D 646 820 175 G3DSA:3.30.70.1010 none none IPR001662
Pfam 437 499 63 PF02798 none Glutathione S-transferase, N-terminal domain IPR004045
Pfam 13 75 63 PF02798 none Glutathione S-transferase, N-terminal domain IPR004045
SUPERFAMILY 427 509 83 SSF52833 none none IPR012336
SUPERFAMILY 2 85 84 SSF52833 none none IPR012336
ProSiteProfiles 1 82 82 PS50404 none Soluble glutathione S-transferase N-terminal domain profile. IPR004045
Phobius 1 677 677 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 678 697 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 473 605 133 PS50405 none Soluble glutathione S-transferase C-terminal domain profile. IPR010987
SUPERFAMILY 505 605 101 SSF47616 none none IPR010987
Phobius 698 820 123 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 415 415 PTHR11260 none none none
Gene3D 93 213 121 G3DSA:1.20.1050.10 none none IPR010987
Gene3D 505 603 99 G3DSA:1.20.1050.10 none none IPR010987
Gene3D 435 500 66 G3DSA:3.40.30.10 none none IPR012336
ProSiteProfiles 87 215 129 PS50405 none Soluble glutathione S-transferase C-terminal domain profile. IPR010987
PANTHER 1 415 415 PTHR11260:SF143 none none none
ProSiteProfiles 425 506 82 PS50404 none Soluble glutathione S-transferase N-terminal domain profile. IPR004045
SUPERFAMILY 256 414 159 SSF89942 none none IPR001662
Pfam 130 197 68 PF00043 none Glutathione S-transferase, C-terminal domain IPR004046
Pfam 518 587 70 PF00043 none Glutathione S-transferase, C-terminal domain IPR004046
ProSiteProfiles 255 415 161 PS50040 none Elongation factor 1 (EF-1) gamma C-terminal domain profile. IPR001662
SUPERFAMILY 647 820 174 SSF89942 none none IPR001662
Pfam 695 767 73 PF00647 none Elongation factor 1 gamma, conserved domain IPR001662
Pfam 254 362 109 PF00647 none Elongation factor 1 gamma, conserved domain IPR001662
Gene3D 4 92 89 G3DSA:3.40.30.10 none none IPR012336

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

0 Targeting