Protein : Qrob_P0342240.2 Q. robur
Protein Identifier  ? Qrob_P0342240.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=2) K12400 - AP-4 complex subunit epsilon-1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 487  
Kegg Orthology  K12400
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0030117 membrane coat Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100249377 1 486 + 486 Gaps:1 32.71 1489 93.22 0.0 AP-4 complex subunit epsilon-like
blastp_kegg lcl|pmum:103330933 1 486 + 486 Gaps:1 50.00 974 92.81 0.0 AP-4 complex subunit epsilon
blastp_kegg lcl|pop:POPTR_0004s24340g 1 486 + 486 Gaps:1 49.69 980 93.22 0.0 epsilon-adaptin family protein
blastp_kegg lcl|fve:101299966 1 486 + 486 Gaps:1 50.31 968 91.79 0.0 AP-4 complex subunit epsilon-like
blastp_kegg lcl|rcu:RCOM_0867610 1 486 + 486 Gaps:1 49.64 981 92.40 0.0 AP-1 complex subunit gamma-2 putative
blastp_kegg lcl|mdm:103438643 1 486 + 486 Gaps:1 49.95 975 91.99 0.0 AP-4 complex subunit epsilon
blastp_kegg lcl|pper:PRUPE_ppa003225mg 1 486 + 486 Gaps:1 82.40 591 92.40 0.0 hypothetical protein
blastp_kegg lcl|mdm:103418495 1 486 + 486 Gaps:1 50.21 970 91.58 0.0 AP-4 complex subunit epsilon-like
blastp_kegg lcl|pxb:103946159 1 486 + 486 Gaps:1 50.21 970 91.58 0.0 AP-4 complex subunit epsilon
blastp_kegg lcl|cit:102624704 13 486 + 474 Gaps:1 49.02 969 93.68 0.0 AP-4 complex subunit epsilon-like
blastp_pdb 1w63_K 27 464 + 438 Gaps:6 70.87 618 26.48 2e-51 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 1w63_I 27 464 + 438 Gaps:6 70.87 618 26.48 2e-51 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 1w63_G 27 464 + 438 Gaps:6 70.87 618 26.48 2e-51 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 1w63_E 27 464 + 438 Gaps:6 70.87 618 26.48 2e-51 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 1w63_C 27 464 + 438 Gaps:6 70.87 618 26.48 2e-51 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 1w63_A 27 464 + 438 Gaps:6 70.87 618 26.48 2e-51 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 2jkt_L 28 463 + 436 Gaps:26 72.87 623 26.21 2e-36 mol:protein length:623 AP-2 COMPLEX SUBUNIT ALPHA-2
blastp_pdb 2jkt_A 28 463 + 436 Gaps:26 72.87 623 26.21 2e-36 mol:protein length:623 AP-2 COMPLEX SUBUNIT ALPHA-2
blastp_pdb 2jkr_L 28 463 + 436 Gaps:26 72.87 623 26.21 2e-36 mol:protein length:623 AP-2 COMPLEX SUBUNIT ALPHA-2
blastp_pdb 2jkr_A 28 463 + 436 Gaps:26 72.87 623 26.21 2e-36 mol:protein length:623 AP-2 COMPLEX SUBUNIT ALPHA-2
blastp_uniprot_sprot sp|Q8L7A9|AP4E_ARATH 1 486 + 486 Gaps:1 51.92 938 88.91 0.0 AP-4 complex subunit epsilon OS Arabidopsis thaliana GN At1g31730 PE 2 SV 1
blastp_uniprot_sprot sp|Q80V94|AP4E1_MOUSE 28 486 + 459 Gaps:3 40.82 1122 46.72 4e-134 AP-4 complex subunit epsilon-1 OS Mus musculus GN Ap4e1 PE 2 SV 3
blastp_uniprot_sprot sp|Q9UPM8|AP4E1_HUMAN 28 486 + 459 Gaps:3 40.28 1137 46.72 1e-132 AP-4 complex subunit epsilon-1 OS Homo sapiens GN AP4E1 PE 1 SV 2
blastp_uniprot_sprot sp|Q54VE0|AP4E_DICDI 24 471 + 448 Gaps:60 46.30 1080 39.80 2e-106 AP-4 complex subunit epsilon OS Dictyostelium discoideum GN ap4e1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8I8U2|AP1G_DICDI 22 464 + 443 Gaps:6 49.50 895 26.19 5e-61 AP-1 complex subunit gamma OS Dictyostelium discoideum GN ap1g1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZUI6|AP1G2_ARATH 19 463 + 445 Gaps:7 51.74 862 28.03 8e-59 AP-1 complex subunit gamma-2 OS Arabidopsis thaliana GN At1g60070 PE 1 SV 2
blastp_uniprot_sprot sp|Q99128|AP1G1_USTMA 28 463 + 436 Gaps:6 51.11 853 25.23 4e-54 AP-1 complex subunit gamma-1 OS Ustilago maydis (strain 521 / FGSC 9021) GN APL4 PE 3 SV 2
blastp_uniprot_sprot sp|Q84K16|AP1G1_ARATH 19 466 + 448 Gaps:11 51.26 876 27.17 1e-52 AP-1 complex subunit gamma-1 OS Arabidopsis thaliana GN GAMMA-ADR PE 1 SV 1
blastp_uniprot_sprot sp|Q5R5M2|AP1G1_PONAB 27 464 + 438 Gaps:6 53.28 822 26.71 4e-50 AP-1 complex subunit gamma-1 OS Pongo abelii GN AP1G1 PE 2 SV 1
blastp_uniprot_sprot sp|O43747|AP1G1_HUMAN 27 464 + 438 Gaps:6 53.28 822 26.48 1e-49 AP-1 complex subunit gamma-1 OS Homo sapiens GN AP1G1 PE 1 SV 5

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 14 486 473 PTHR22780:SF13 none none IPR017109
SUPERFAMILY 22 464 443 SSF48371 none none IPR016024
PANTHER 14 486 473 PTHR22780 none none none
Gene3D 21 465 445 G3DSA:1.25.10.10 none none IPR011989
PIRSF 11 486 476 PIRSF037097 none none IPR017109
Pfam 54 464 411 PF01602 none Adaptin N terminal region IPR002553

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting