Protein : Qrob_P0340100.2 Q. robur
Protein Identifier  ? Qrob_P0340100.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K17618 - ubiquitin-like domain-containing CTD phosphatase 1 [EC:3.1.3.16] Code Enzyme  EC:3.1.3.16
Gene Prediction Quality  validated Protein length 

Sequence

Length: 346  
Kegg Orthology  K17618
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0004721 phosphoprotein phosphatase activity Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0290900 21 345 + 325 Gaps:3 94.99 339 86.96 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_006950 21 345 + 325 Gaps:3 96.70 333 86.96 0.0 Ubiquitin family protein
blastp_kegg lcl|vvi:100262993 18 345 + 328 Gaps:3 99.39 327 86.15 0.0 ubiquitin-like domain-containing CTD phosphatase
blastp_kegg lcl|fve:101299479 14 344 + 331 Gaps:4 99.40 333 82.78 0.0 ubiquitin-like domain-containing CTD phosphatase-like isoform 1
blastp_kegg lcl|cic:CICLE_v10001794mg 24 345 + 322 Gaps:3 96.08 332 86.83 0.0 hypothetical protein
blastp_kegg lcl|cmo:103488859 26 345 + 320 Gaps:3 95.77 331 85.80 0.0 ubiquitin-like domain-containing CTD phosphatase
blastp_kegg lcl|pmum:103319038 7 344 + 338 Gaps:2 99.41 338 80.06 0.0 ubiquitin-like domain-containing CTD phosphatase
blastp_kegg lcl|cit:102613626 24 345 + 322 Gaps:3 96.08 332 86.52 0.0 ubiquitin-like domain-containing CTD phosphatase-like
blastp_kegg lcl|cit:102626463 24 345 + 322 Gaps:3 96.08 332 86.52 0.0 ubiquitin-like domain-containing CTD phosphatase-like
blastp_kegg lcl|pper:PRUPE_ppa008241mg 5 344 + 340 Gaps:2 99.41 340 79.29 0.0 hypothetical protein
blastp_pdb 3shq_A 32 334 + 303 Gaps:12 94.69 320 54.13 1e-99 mol:protein length:320 UBLCP1
blastp_pdb 1v5t_A 26 102 + 77 Gaps:2 85.56 90 45.45 3e-09 mol:protein length:90 8430435I17Rik Protein
blastp_pdb 2kx3_A 26 103 + 78 Gaps:2 96.30 81 44.87 4e-09 mol:protein length:81 Ubiquitin-like domain-containing CTD phosphat
blastp_uniprot_sprot sp|Q8W3M6|UBCP_ARATH 19 344 + 326 Gaps:3 95.00 340 81.73 0.0 Ubiquitin-like domain-containing CTD phosphatase OS Arabidopsis thaliana GN At4g06599 PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZJJ8|UBCP1_CHICK 26 334 + 309 Gaps:8 97.17 318 57.28 4e-117 Ubiquitin-like domain-containing CTD phosphatase 1 OS Gallus gallus GN UBLCP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5FWT7|UBCP1_RAT 26 334 + 309 Gaps:8 97.17 318 57.61 2e-116 Ubiquitin-like domain-containing CTD phosphatase 1 OS Rattus norvegicus GN Ublcp1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8BGR9|UBCP1_MOUSE 26 334 + 309 Gaps:8 97.17 318 57.61 2e-116 Ubiquitin-like domain-containing CTD phosphatase 1 OS Mus musculus GN Ublcp1 PE 1 SV 1
blastp_uniprot_sprot sp|Q641F1|UBCP1_XENLA 26 334 + 309 Gaps:8 97.17 318 56.31 1e-113 Ubiquitin-like domain-containing CTD phosphatase 1 OS Xenopus laevis GN ublcp1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6DI37|UBCP1_DANRE 26 334 + 309 Gaps:8 97.17 318 55.34 4e-113 Ubiquitin-like domain-containing CTD phosphatase 1 OS Danio rerio GN ublcp1 PE 2 SV 1
blastp_uniprot_sprot sp|Q28EX9|UBCP1_XENTR 26 334 + 309 Gaps:8 97.17 318 56.31 2e-112 Ubiquitin-like domain-containing CTD phosphatase 1 OS Xenopus tropicalis GN ublcp1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8WVY7|UBCP1_HUMAN 26 334 + 309 Gaps:2 97.17 318 56.63 4e-112 Ubiquitin-like domain-containing CTD phosphatase 1 OS Homo sapiens GN UBLCP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q2KJD7|UBCP1_BOVIN 26 334 + 309 Gaps:2 97.17 318 56.63 4e-112 Ubiquitin-like domain-containing CTD phosphatase 1 OS Bos taurus GN UBLCP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5R4C4|UBCP1_PONAB 26 334 + 309 Gaps:2 97.17 318 56.31 2e-111 Ubiquitin-like domain-containing CTD phosphatase 1 OS Pongo abelii GN UBLCP1 PE 2 SV 1
rpsblast_cdd gnl|CDD|131299 140 334 + 195 none 100.00 195 74.87 1e-102 TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains in this case: LLVLD(ILV)D(YH)T I(VMG)IWS and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3 it is formally a "class III" HAD.
rpsblast_cdd gnl|CDD|202514 161 323 + 163 Gaps:33 99.35 153 30.92 1e-20 pfam03031 NIF NLI interacting factor-like phosphatase. This family contains a number of NLI interacting factor isoforms and also an N-terminal regions of RNA polymerase II CTC phosphatase and FCP1 serine phosphatase. This region has been identified as the minimal phosphatase domain.
rpsblast_cdd gnl|CDD|176408 26 100 + 75 Gaps:1 100.00 74 45.95 4e-20 cd01813 UBP_N UBP ubiquitin processing protease. The UBP (ubiquitin processing protease) domain (also referred to as USP which stands for "ubiquitin-specific protease") is present at in a large family of cysteine proteases that specifically cleave ubiquitin conjugates. This family includes Rpn11 UBP6 (USP14) USP7 (HAUSP). This domain is closely related to the amino-terminal ubiquitin-like domain of BAG1 (Bcl2-associated anthanogene1) protein and is found only in eukaryotes.
rpsblast_cdd gnl|CDD|197796 159 295 + 137 Gaps:49 95.95 148 25.35 3e-11 smart00577 CPDc catalytic domain of ctd-like phosphatases.
rpsblast_kog gnl|CDD|36818 148 333 + 186 Gaps:16 70.99 262 22.04 2e-23 KOG1605 KOG1605 KOG1605 TFIIF-interacting CTD phosphatase including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription].
rpsblast_kog gnl|CDD|37083 24 122 + 99 Gaps:11 21.56 473 32.35 5e-07 KOG1872 KOG1872 KOG1872 Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones].

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 149 325 177 G3DSA:3.40.50.1000 none none IPR023214
Phobius 14 18 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 33 69 37 PF00240 none Ubiquitin family IPR000626
SUPERFAMILY 148 328 181 SSF56784 none none IPR023214
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
ProSiteProfiles 26 98 73 PS50053 none Ubiquitin domain profile. IPR000626
SMART 159 301 143 SM00577 none catalytic domain of ctd-like phosphatases IPR004274
Phobius 19 345 327 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 161 323 163 PF03031 none NLI interacting factor-like phosphatase IPR004274
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 20 104 85 SSF54236 none none IPR029071
SMART 26 100 75 SM00213 none Ubiquitin homologues IPR000626
ProSiteProfiles 156 317 162 PS50969 none FCP1 homology domain profile. IPR004274
PANTHER 10 338 329 PTHR32054:SF0 none none none
Phobius 2 13 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Coils 131 152 22 Coil none none none
Gene3D 22 105 84 G3DSA:3.10.20.90 none none none
TIGRFAM 140 334 195 TIGR02245 none HAD_IIID1: HAD hydrolase, family IIID IPR011943
PANTHER 10 338 329 PTHR32054 none none none

0 Localization

0 Qtllist

0 Targeting