Protein : Qrob_P0337910.2 Q. robur
Protein Identifier  ? Qrob_P0337910.2 Organism . Name  Quercus robur
Score  1.0 Score Type  egn
Protein Description  (M=1) K02604 - origin recognition complex subunit 2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 384  
Kegg Orthology  K02604
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006260 DNA replication The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO:0000808 origin recognition complex A multisubunit complex that is located at the replication origins of a chromosome.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10012027mg 12 383 + 372 Gaps:15 98.35 363 84.87 0.0 hypothetical protein
blastp_kegg lcl|cit:102629303 12 383 + 372 Gaps:15 98.35 363 85.15 0.0 origin recognition complex subunit 2-like
blastp_kegg lcl|vvi:100253929 12 383 + 372 Gaps:16 98.34 362 82.58 0.0 origin recognition complex subunit 2-like
blastp_kegg lcl|tcc:TCM_021969 12 382 + 371 Gaps:16 98.34 361 83.94 0.0 Origin recognition complex second largest subunit 2
blastp_kegg lcl|pop:POPTR_0003s09350g 1 383 + 383 Gaps:20 100.00 363 82.09 0.0 Origin recognition complex subunit 2 family protein
blastp_kegg lcl|rcu:RCOM_1248790 5 383 + 379 Gaps:19 99.17 363 82.22 0.0 plant origin recognition complex subunit putative
blastp_kegg lcl|mdm:103441127 1 383 + 383 Gaps:21 100.00 362 79.83 0.0 origin recognition complex subunit 2
blastp_kegg lcl|csv:101204992 6 382 + 377 Gaps:18 99.72 360 78.83 0.0 origin recognition complex subunit 2-like
blastp_kegg lcl|cmo:103487905 6 382 + 377 Gaps:18 99.72 360 79.11 0.0 origin recognition complex subunit 2
blastp_kegg lcl|pmum:103320319 1 383 + 383 Gaps:23 100.00 360 79.44 0.0 origin recognition complex subunit 2
blastp_uniprot_sprot sp|Q38899|ORC2_ARATH 16 383 + 368 Gaps:16 96.97 363 74.15 0.0 Origin recognition complex subunit 2 OS Arabidopsis thaliana GN ORC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q13416|ORC2_HUMAN 45 378 + 334 Gaps:30 52.69 577 38.49 2e-62 Origin recognition complex subunit 2 OS Homo sapiens GN ORC2 PE 1 SV 2
blastp_uniprot_sprot sp|Q75PQ8|ORC2_RAT 45 378 + 334 Gaps:30 52.78 576 36.84 5e-58 Origin recognition complex subunit 2 OS Rattus norvegicus GN Orc2 PE 2 SV 1
blastp_uniprot_sprot sp|A6QNM3|ORC2_BOVIN 10 378 + 369 Gaps:40 58.75 577 36.87 7e-58 Origin recognition complex subunit 2 OS Bos taurus GN ORC2 PE 2 SV 2
blastp_uniprot_sprot sp|Q60862|ORC2_MOUSE 45 378 + 334 Gaps:30 52.78 576 35.53 5e-55 Origin recognition complex subunit 2 OS Mus musculus GN Orc2 PE 1 SV 1
blastp_uniprot_sprot sp|Q91628|ORC2_XENLA 45 378 + 334 Gaps:30 54.48 558 35.86 3e-53 Origin recognition complex subunit 2 OS Xenopus laevis GN orc2 PE 2 SV 1
blastp_uniprot_sprot sp|Q24168|ORC2_DROME 60 380 + 321 Gaps:30 47.09 618 35.40 9e-48 Origin recognition complex subunit 2 OS Drosophila melanogaster GN Orc2 PE 1 SV 2
blastp_uniprot_sprot sp|Q09142|ORC2_SCHPO 9 381 + 373 Gaps:48 67.85 535 30.85 2e-35 Origin recognition complex subunit 2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN orc2 PE 1 SV 1
blastp_uniprot_sprot sp|Q55CU7|ORC2_DICDI 10 381 + 372 Gaps:60 98.72 391 29.53 9e-35 Origin recognition complex subunit 2 OS Dictyostelium discoideum GN orcB PE 3 SV 1
blastp_uniprot_sprot sp|P32833|ORC2_YEAST 73 381 + 309 Gaps:54 51.45 620 29.15 7e-32 Origin recognition complex subunit 2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ORC2 PE 1 SV 2
rpsblast_cdd gnl|CDD|202882 35 374 + 340 Gaps:30 100.00 318 41.19 4e-86 pfam04084 ORC2 Origin recognition complex subunit 2. All DNA replication initiation is driven by a single conserved eukaryotic initiator complex termed he origin recognition complex (ORC). The ORC is a six protein complex. The function of ORC is reviewed in.
rpsblast_cdd gnl|CDD|35134 33 378 + 346 Gaps:36 60.93 535 27.61 1e-36 COG5575 ORC2 Origin recognition complex subunit 2 [DNA replication recombination and repair].
rpsblast_kog gnl|CDD|38139 2 383 + 382 Gaps:34 68.73 518 41.57 2e-96 KOG2928 KOG2928 KOG2928 Origin recognition complex subunit 2 [Replication recombination and repair].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 8 383 376 PTHR14052:SF0 none none none
Pfam 35 373 339 PF04084 none Origin recognition complex subunit 2 IPR007220
PANTHER 8 383 376 PTHR14052 none none IPR007220

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting