3 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0003777 | microtubule motor activity | Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP). |
| GO:0007018 | microtubule-based movement | A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules. |
| GO:0005871 | kinesin complex | Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work. |
10 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|cit:102617742 | 58 | 527 | + | 470 | Gaps:27 | 44.21 | 1002 | 75.62 | 0.0 | kinesin-related protein 4-like |
| blastp_kegg | lcl|cic:CICLE_v10010972mg | 58 | 527 | + | 470 | Gaps:27 | 43.99 | 1007 | 75.62 | 0.0 | hypothetical protein |
| blastp_kegg | lcl|gmx:100815027 | 58 | 532 | + | 475 | Gaps:33 | 43.98 | 1014 | 73.32 | 0.0 | centromere-associated protein E-like |
| blastp_kegg | lcl|gmx:100787892 | 58 | 532 | + | 475 | Gaps:33 | 44.29 | 1007 | 73.09 | 0.0 | kinesin-related protein 4-like |
| blastp_kegg | lcl|pmum:103339631 | 58 | 536 | + | 479 | Gaps:35 | 44.14 | 1006 | 74.32 | 0.0 | centromere-associated protein E |
| blastp_kegg | lcl|pvu:PHAVU_001G144600g | 58 | 537 | + | 480 | Gaps:36 | 44.27 | 1012 | 72.77 | 0.0 | hypothetical protein |
| blastp_kegg | lcl|pop:POPTR_0006s20950g | 58 | 524 | + | 467 | Gaps:28 | 43.42 | 1011 | 73.12 | 0.0 | POPTRDRAFT_831996 kinesin motor family protein |
| blastp_kegg | lcl|rcu:RCOM_0279080 | 58 | 527 | + | 470 | Gaps:28 | 43.76 | 1010 | 71.72 | 0.0 | kinesin heavy chain putative |
| blastp_kegg | lcl|pop:POPTR_0016s06040g | 58 | 537 | + | 480 | Gaps:46 | 42.38 | 1024 | 74.42 | 0.0 | POPTRDRAFT_255975 hypothetical protein |
| blastp_kegg | lcl|tcc:TCM_024960 | 58 | 524 | + | 467 | Gaps:45 | 42.89 | 984 | 77.25 | 0.0 | P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 |
11 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| PANTHER | 349 | 507 | 159 | PTHR24115 | none | none | IPR027640 |
| PANTHER | 175 | 230 | 56 | PTHR24115 | none | none | IPR027640 |
| Coils | 472 | 500 | 29 | Coil | none | none | none |
| PANTHER | 246 | 315 | 70 | PTHR24115:SF409 | none | none | none |
| PANTHER | 246 | 315 | 70 | PTHR24115 | none | none | IPR027640 |
| PANTHER | 349 | 507 | 159 | PTHR24115:SF409 | none | none | none |
| Coils | 396 | 417 | 22 | Coil | none | none | none |
| Coils | 347 | 382 | 36 | Coil | none | none | none |
| Coils | 272 | 307 | 36 | Coil | none | none | none |
| PANTHER | 175 | 230 | 56 | PTHR24115:SF409 | none | none | none |
| Coils | 184 | 205 | 22 | Coil | none | none | none |
9 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran2_2014_nPriLBD_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,36 | 0 | 30,43 | lod | 2,5806 | 5,1 |
| Bourran2_2014_nSecLBD_A4 | Qrob_Chr07 | 7 | v_8327_222 | s_1A4WGY_363 | 16,04 | 0 | 44,69 | lod | 2,6373 | 6,5 |
| Bourran2_2014_nP_A4 | Qrob_Chr11 | 11 | s_1B58GB_1413 | s_1A5BYY_1671 | 11,15 | 0 | 42,38 | lod | 1,8913 | 4,5 |
| Bourran2_2015_nSeqBC_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,06 | 25,47 | 27,72 | lod | 3.6 | 7.1 |
| Bourran2_2014_nP_3P | Qrob_Chr11 | 11 | v_11486_194 | s_1AT3E_2335 | 7,9 | 0,09 | 30,09 | lod | 2,3636 | 5 |
| Bourran2_2015_nEpis_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 34,94 | 34,88 | 37,45 | lod | 3.1 | 7 |
| Bourran2_2015_nEpiBC_A4 | Qrob_Chr07 | 7 | s_1DP9TW_798 | v_8128_173 | 22,61 | 22,14 | 22,73 | lod | 3.1 | 8.5 |
| Bourran2_2014_nEpiBC_A4 | Qrob_Chr07 | 7 | s_2FI9D9_500 | s_1AXDMJ_325 | 12,26 | 0 | 34,9 | lod | 2,2306 | 6,1 |
| Bourran2_2014_nPriBD_3P | Qrob_Chr11 | 11 | v_11486_194 | s_1AT3E_2335 | 5,54 | 0,4 | 20,6 | lod | 2,6345 | 5,9 |
