Protein : Qrob_P0332980.2 Q. robur
Protein Identifier  ? Qrob_P0332980.2 Organism . Name  Quercus robur
Score  83.0 Score Type  egn
Protein Description  (M=2) PTHR11132//PTHR11132:SF26 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 287  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0015780 nucleotide-sugar transport The directed movement of nucleotide-sugars into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.
GO:0005338 nucleotide-sugar transmembrane transporter activity Enables the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101496553 129 260 + 132 Gaps:7 40.30 335 75.56 2e-60 UDP-galactose transporter 2-like
blastp_kegg lcl|pvu:PHAVU_009G138400g 129 260 + 132 Gaps:7 40.54 333 76.30 3e-59 hypothetical protein
blastp_kegg lcl|tcc:TCM_001285 129 260 + 132 Gaps:7 40.30 335 73.33 3e-58 Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase putative isoform 1
blastp_kegg lcl|gmx:100794276 129 260 + 132 Gaps:7 40.54 333 74.07 3e-58 UDP-galactose transporter 2-like
blastp_kegg lcl|gmx:100800306 129 260 + 132 Gaps:7 40.54 333 74.07 3e-58 UDP-galactose transporter 2-like
blastp_kegg lcl|rcu:RCOM_0031070 129 260 + 132 Gaps:7 40.30 335 74.81 5e-58 organic anion transporter putative
blastp_kegg lcl|vvi:100257791 129 260 + 132 Gaps:7 40.06 337 75.56 5e-58 UDP-galactose transporter 2-like
blastp_kegg lcl|mtr:MTR_3g095130 129 260 + 132 Gaps:7 40.30 335 75.56 5e-58 hypothetical protein
blastp_kegg lcl|pda:103697070 129 260 + 132 Gaps:7 40.18 336 71.85 1e-57 UDP-galactose transporter 2-like
blastp_kegg lcl|pxb:103937052 132 260 + 129 Gaps:6 40.66 332 76.30 2e-57 UDP-galactose transporter 2-like
blastp_uniprot_sprot sp|Q9SRE4|UGAL2_ARATH 126 260 + 135 Gaps:7 39.77 347 48.55 2e-30 UDP-galactose transporter 2 OS Arabidopsis thaliana GN UDP-GALT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RXL8|Y1689_ARATH 128 272 + 145 Gaps:9 42.02 357 36.00 4e-22 Uncharacterized membrane protein At1g06890 OS Arabidopsis thaliana GN At1g06890 PE 1 SV 1
rpsblast_cdd gnl|CDD|202556 161 260 + 100 Gaps:11 74.50 149 25.23 9e-14 pfam03151 TPT Triose-phosphate Transporter family. This family includes transporters with a specificity for triose phosphate.
rpsblast_kog gnl|CDD|36654 126 260 + 135 Gaps:10 43.99 316 31.65 5e-20 KOG1441 KOG1441 KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism Amino acid transport and metabolism].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 140 260 121 PTHR11132 none none none
Pfam 161 260 100 PF03151 none Triose-phosphate Transporter family IPR004853
Phobius 225 247 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 156 160 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 180 190 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 248 286 39 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 140 260 121 PTHR11132:SF26 none none IPR031089
Phobius 191 213 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 214 224 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 136 136 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 137 155 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 161 179 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

4 Localization

Analysis Start End Length
TMHMM 136 158 22
TMHMM 191 213 22
TMHMM 226 248 22
TMHMM 263 285 22

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8

0 Targeting