Protein : Qrob_P0332760.2 Q. robur
Protein Identifier  ? Qrob_P0332760.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR13778:SF4 - GALACTURONOSYLTRANSFERASE-LIKE 3-RELATED (PTHR13778:SF4) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 187  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103341435 1 124 + 124 Gaps:2 30.22 417 76.98 3e-58 probable galacturonosyltransferase-like 3
blastp_kegg lcl|pper:PRUPE_ppa007794mg 1 124 + 124 Gaps:2 35.49 355 76.19 4e-57 hypothetical protein
blastp_kegg lcl|pxb:103947085 1 124 + 124 Gaps:2 35.00 360 73.02 3e-55 probable galacturonosyltransferase-like 3
blastp_kegg lcl|mdm:103425436 1 124 + 124 Gaps:2 35.20 358 73.02 4e-55 probable galacturonosyltransferase-like 3
blastp_kegg lcl|mdm:103414255 1 124 + 124 Gaps:1 35.01 357 73.60 5e-55 probable galacturonosyltransferase-like 3
blastp_kegg lcl|pxb:103929190 1 124 + 124 Gaps:1 35.01 357 73.60 6e-55 probable galacturonosyltransferase-like 3
blastp_kegg lcl|fve:101305934 1 124 + 124 Gaps:2 34.76 351 75.41 1e-54 probable galacturonosyltransferase-like 3-like
blastp_kegg lcl|mdm:103430648 1 124 + 124 Gaps:1 35.01 357 72.80 4e-54 probable galacturonosyltransferase-like 3
blastp_kegg lcl|mdm:103414524 1 124 + 124 Gaps:1 35.01 357 72.80 4e-54 probable galacturonosyltransferase-like 3
blastp_kegg lcl|mdm:103451677 1 124 + 124 Gaps:1 35.01 357 72.80 4e-54 probable galacturonosyltransferase-like 3
blastp_uniprot_sprot sp|Q0V7R1|GATL3_ARATH 1 125 + 125 Gaps:2 35.65 345 69.92 2e-43 Probable galacturonosyltransferase-like 3 OS Arabidopsis thaliana GN GATL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M8J2|GATL4_ARATH 1 122 + 122 Gaps:2 34.19 351 60.00 2e-42 Probable galacturonosyltransferase-like 4 OS Arabidopsis thaliana GN GATL4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LHD2|GATLA_ARATH 1 122 + 122 Gaps:2 32.88 365 55.00 2e-35 Probable galacturonosyltransferase-like 10 OS Arabidopsis thaliana GN GATL10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S7G2|GATL2_ARATH 1 125 + 125 Gaps:3 35.78 341 49.18 2e-34 Probable galacturonosyltransferase-like 2 OS Arabidopsis thaliana GN GATL2 PE 2 SV 1
blastp_uniprot_sprot sp|O04253|GATL6_ARATH 1 124 + 124 Gaps:2 35.26 346 53.28 9e-34 Probable galacturonosyltransferase-like 6 OS Arabidopsis thaliana GN GATL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYF4|GATL7_ARATH 1 125 + 125 Gaps:5 33.24 361 54.17 4e-33 Probable galacturonosyltransferase-like 7 OS Arabidopsis thaliana GN GATL7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LN68|GATL1_ARATH 1 126 + 126 Gaps:1 35.61 351 57.60 6e-33 Probable galacturonosyltransferase-like 1 OS Arabidopsis thaliana GN GATL1 PE 2 SV 1
blastp_uniprot_sprot sp|O04536|GATL9_ARATH 1 122 + 122 Gaps:1 31.54 390 51.22 1e-31 Probable galacturonosyltransferase-like 9 OS Arabidopsis thaliana GN GATL9 PE 2 SV 1
blastp_uniprot_sprot sp|O48684|GATL8_ARATH 1 122 + 122 Gaps:1 31.30 393 52.03 3e-31 Probable galacturonosyltransferase-like 8 OS Arabidopsis thaliana GN GATL8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FWY9|GATL5_ARATH 1 124 + 124 Gaps:4 33.80 361 50.82 2e-30 Probable galacturonosyltransferase-like 5 OS Arabidopsis thaliana GN GATL5 PE 2 SV 1
rpsblast_cdd gnl|CDD|201828 1 123 + 123 Gaps:10 48.79 248 27.27 3e-11 pfam01501 Glyco_transf_8 Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1 and glycogenin glucosyltransferase.
rpsblast_cdd gnl|CDD|133051 20 125 + 106 Gaps:26 46.69 257 26.67 1e-07 cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1 glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
rpsblast_cdd gnl|CDD|133037 36 125 + 90 Gaps:19 28.63 248 30.99 1e-07 cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1 4-galactosyltransferase LOS-alpha-1 3-D-galactosyltransferase UDP-glucose:(galactosyl) LPS alpha1 2-glucosyltransferase UDP-galactose: (glucosyl) LPS alpha1 2-galactosyltransferase and UDP-glucose:(glucosyl) LPS alpha1 2-glucosyltransferase. Alpha-1 4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli the three alpha-1 2-glycosyltransferases that are involved in the synthesis of the outer core region of the LPS are all members of this family. The three enzymes share 40 % of sequence identity but have different sugar donor or acceptor specificities representing the structural diversity of LPS.
rpsblast_cdd gnl|CDD|132996 4 126 + 123 Gaps:15 47.15 246 28.45 6e-07 cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1 glycogenin glucosyltransferase and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation most commonly Mn2+.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 1 125 125 SSF53448 none none IPR029044
PANTHER 1 126 126 PTHR13778 none none none
Phobius 1 140 140 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 1 124 124 PF01501 none Glycosyl transferase family 8 IPR002495
Phobius 161 186 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 126 126 PTHR13778:SF4 none none none
Gene3D 1 125 125 G3DSA:3.90.550.10 none none IPR029044
Phobius 141 160 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

1 Localization

Analysis Start End Length
TMHMM 141 160 19

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8

0 Targeting