Protein : Qrob_P0330410.2 Q. robur
Protein Identifier  ? Qrob_P0330410.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=1) KOG1099 - SAM-dependent methyltransferase/cell division protein FtsJ [Cell cycle control cell division chromosome partitioning General function prediction only]. Code Enzyme  EC:2.1.1.167
Gene Prediction Quality  validated Protein length 

Sequence

Length: 452  
Kegg Orthology  K14857
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0008168 methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
GO:0032259 methylation The process in which a methyl group is covalently attached to a molecule.
GO:0001510 RNA methylation Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.
GO:0008649 rRNA methyltransferase activity Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule.
GO:0031167 rRNA methylation The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1447470 1 350 + 350 Gaps:33 45.77 828 68.34 3e-169 ribosomal RNA methyltransferase putative
blastp_kegg lcl|tcc:TCM_006860 1 350 + 350 Gaps:56 44.76 849 66.58 1e-161 FtsJ-like methyltransferase family protein
blastp_kegg lcl|cmo:103499682 1 334 + 334 Gaps:55 42.61 852 66.94 8e-157 adoMet-dependent rRNA methyltransferase spb1
blastp_kegg lcl|cit:102627301 1 340 + 340 Gaps:52 44.47 832 64.86 3e-155 putative rRNA methyltransferase-like
blastp_kegg lcl|cam:101509221 2 351 + 350 Gaps:33 45.44 834 62.80 8e-154 putative rRNA methyltransferase-like
blastp_kegg lcl|csv:101209556 1 334 + 334 Gaps:55 42.51 854 65.84 2e-153 adoMet-dependent rRNA methyltransferase spb1-like
blastp_kegg lcl|vvi:100255646 1 350 + 350 Gaps:33 44.77 842 63.66 6e-152 adoMet-dependent rRNA methyltransferase spb1-like
blastp_kegg lcl|mtr:MTR_4g078640 3 350 + 348 Gaps:38 43.55 868 61.11 4e-150 AdoMet-dependent rRNA methyltransferase spb1
blastp_kegg lcl|crb:CARUB_v10004151mg 1 350 + 350 Gaps:33 46.56 814 61.74 9e-150 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_011G044300g 1 350 + 350 Gaps:53 45.39 835 63.85 8e-148 hypothetical protein
blastp_pdb 2nyu_B 22 158 + 137 Gaps:14 72.96 196 34.97 8e-15 mol:protein length:196 Putative ribosomal RNA methyltransferase 2
blastp_pdb 2nyu_A 22 158 + 137 Gaps:14 72.96 196 34.97 8e-15 mol:protein length:196 Putative ribosomal RNA methyltransferase 2
blastp_pdb 1ej0_A 21 158 + 138 Gaps:3 75.00 180 33.33 2e-13 mol:protein length:180 FTSJ
blastp_pdb 1eiz_A 21 158 + 138 Gaps:3 75.00 180 33.33 2e-13 mol:protein length:180 FTSJ
blastp_pdb 2plw_A 21 158 + 138 Gaps:21 76.12 201 22.88 4e-10 mol:protein length:201 Ribosomal RNA methyltransferase putative
blastp_pdb 3dou_A 23 158 + 136 Gaps:9 69.63 191 29.32 8e-08 mol:protein length:191 Ribosomal RNA large subunit methyltransferase
blastp_uniprot_sprot sp|Q52C47|SPB1_MAGO7 3 350 + 348 Gaps:48 45.09 865 36.67 3e-63 AdoMet-dependent rRNA methyltransferase SPB1 OS Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN SPB1 PE 3 SV 2
blastp_uniprot_sprot sp|Q9P6V8|SPB1_NEUCR 3 350 + 348 Gaps:40 45.97 831 36.39 3e-63 AdoMet-dependent rRNA methyltransferase spb1 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN spb1 PE 3 SV 2
blastp_uniprot_sprot sp|Q4WVH3|SPB1_ASPFU 3 348 + 346 Gaps:51 48.18 795 37.86 6e-63 AdoMet-dependent rRNA methyltransferase spb1 OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN spb1 PE 3 SV 1
blastp_uniprot_sprot sp|Q5BH88|SPB1_EMENI 3 342 + 340 Gaps:55 47.27 806 38.58 6e-63 AdoMet-dependent rRNA methyltransferase spb1 OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN spb1 PE 3 SV 1
blastp_uniprot_sprot sp|P0CS78|SPB1_CRYNJ 3 351 + 349 Gaps:67 44.93 908 36.03 6e-61 AdoMet-dependent rRNA methyltransferase SPB1 OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN SPB1 PE 3 SV 1
blastp_uniprot_sprot sp|P0CS79|SPB1_CRYNB 3 351 + 349 Gaps:67 44.93 908 36.03 6e-61 AdoMet-dependent rRNA methyltransferase SPB1 OS Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN SPB1 PE 3 SV 1
blastp_uniprot_sprot sp|Q4P6G5|SPB1_USTMA 3 330 + 328 Gaps:66 41.04 921 35.71 3e-60 AdoMet-dependent rRNA methyltransferase SPB1 OS Ustilago maydis (strain 521 / FGSC 9021) GN SPB1 PE 3 SV 1
blastp_uniprot_sprot sp|O42832|SPB1_SCHPO 1 351 + 351 Gaps:42 47.76 802 36.03 8e-60 AdoMet-dependent rRNA methyltransferase spb1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN spb1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8IY81|SPB1_HUMAN 2 295 + 294 Gaps:36 37.31 847 38.29 3e-59 pre-rRNA processing protein FTSJ3 OS Homo sapiens GN FTSJ3 PE 1 SV 2
blastp_uniprot_sprot sp|Q5RJT2|SPB1_RAT 2 295 + 294 Gaps:36 38.12 829 37.66 3e-59 pre-rRNA processing protein FTSJ3 OS Rattus norvegicus GN Ftsj3 PE 2 SV 1
rpsblast_cdd gnl|CDD|30641 6 168 + 163 Gaps:4 78.54 205 37.89 2e-36 COG0293 FtsJ 23S rRNA methylase [Translation ribosomal structure and biogenesis].
rpsblast_cdd gnl|CDD|201939 22 164 + 143 Gaps:6 78.53 177 39.57 6e-36 pfam01728 FtsJ FtsJ-like methyltransferase. This family consists of FtsJ from various bacterial and archaeal sources FtsJ is a methyltransferase but actually has no effect on cell division. FtsJ's substrate is the 23S rRNA. The 1.5 A crystal structure of FtsJ in complex with its cofactor S-adenosylmethionine revealed that FtsJ has a methyltransferase fold. This family also includes the N terminus of flaviviral NS5 protein. It has been hypothesised that the N-terminal domain of NS5 is a methyltransferase involved in viral RNA capping.
rpsblast_cdd gnl|CDD|192857 209 350 + 142 Gaps:3 90.26 154 37.41 9e-31 pfam11861 DUF3381 Domain of unknown function (DUF3381). This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 156 to 174 amino acids in length. This domain is found associated with pfam07780 pfam01728.
rpsblast_cdd gnl|CDD|161879 11 158 + 148 Gaps:3 77.13 188 42.76 2e-30 TIGR00438 rrmJ cell division protein FtsJ. Methylates the 23S rRNA. Previously known as cell division protein ftsJ.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 21 160 140 G3DSA:3.40.50.150 none none IPR029063
Coils 333 354 22 Coil none none none
Pfam 22 166 145 PF01728 none FtsJ-like methyltransferase IPR002877
Hamap 2 274 273 MF_01547 none Ribosomal RNA large subunit methyltransferase E [rlmE]. IPR015507
SUPERFAMILY 21 186 166 SSF53335 none none IPR029063
Phobius 395 411 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 358 358 PTHR10920:SF13 none none IPR028589
Phobius 412 451 40 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 394 394 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 358 358 PTHR10920 none none IPR015507
Pfam 207 354 148 PF11861 none Domain of unknown function (DUF3381) IPR024576

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting