Protein : Qrob_P0330390.2 Q. robur
Protein Identifier  ? Qrob_P0330390.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) K14857 - AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] Code Enzyme  EC:2.1.1.167
Gene Prediction Quality  validated Protein length 

Sequence

Length: 491  
Kegg Orthology  K14857
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0008168 methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
GO:0032259 methylation The process in which a methyl group is covalently attached to a molecule.
GO:0001510 RNA methylation Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.
GO:0008649 rRNA methyltransferase activity Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule.
GO:0031167 rRNA methylation The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1447470 6 463 + 458 Gaps:14 54.11 828 73.88 0.0 ribosomal RNA methyltransferase putative
blastp_kegg lcl|tcc:TCM_006860 6 488 + 483 Gaps:23 58.19 849 71.26 0.0 FtsJ-like methyltransferase family protein
blastp_kegg lcl|pmum:103335669 6 488 + 483 Gaps:17 57.55 848 71.11 0.0 putative rRNA methyltransferase
blastp_kegg lcl|gmx:100790741 6 465 + 460 Gaps:8 55.25 829 71.18 0.0 putative rRNA methyltransferase-like
blastp_kegg lcl|pper:PRUPE_ppa001381mg 6 488 + 483 Gaps:17 58.03 841 69.88 0.0 hypothetical protein
blastp_kegg lcl|pxb:103934638 6 488 + 483 Gaps:21 57.24 863 70.24 0.0 putative rRNA methyltransferase
blastp_kegg lcl|gmx:100784758 6 465 + 460 Gaps:6 55.16 834 70.87 0.0 putative rRNA methyltransferase-like
blastp_kegg lcl|pxb:103937441 6 488 + 483 Gaps:21 57.44 860 70.04 0.0 putative rRNA methyltransferase
blastp_kegg lcl|vvi:100255646 6 488 + 483 Gaps:10 56.65 842 71.70 0.0 adoMet-dependent rRNA methyltransferase spb1-like
blastp_kegg lcl|pxb:103967111 6 488 + 483 Gaps:29 57.87 864 68.40 0.0 putative rRNA methyltransferase
blastp_uniprot_sprot sp|O42832|SPB1_SCHPO 6 427 + 422 Gaps:67 51.75 802 35.42 1e-42 AdoMet-dependent rRNA methyltransferase spb1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN spb1 PE 1 SV 2
blastp_uniprot_sprot sp|Q52C47|SPB1_MAGO7 6 418 + 413 Gaps:57 50.64 865 31.05 8e-40 AdoMet-dependent rRNA methyltransferase SPB1 OS Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN SPB1 PE 3 SV 2
blastp_uniprot_sprot sp|Q9P6V8|SPB1_NEUCR 6 340 + 335 Gaps:42 40.55 831 35.91 2e-39 AdoMet-dependent rRNA methyltransferase spb1 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN spb1 PE 3 SV 2
blastp_uniprot_sprot sp|Q751U1|SPB1_ASHGO 6 283 + 278 Gaps:42 35.42 830 37.07 5e-38 AdoMet-dependent rRNA methyltransferase SPB1 OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN SPB1 PE 3 SV 2
blastp_uniprot_sprot sp|Q4P6G5|SPB1_USTMA 6 347 + 342 Gaps:33 38.55 921 33.24 1e-37 AdoMet-dependent rRNA methyltransferase SPB1 OS Ustilago maydis (strain 521 / FGSC 9021) GN SPB1 PE 3 SV 1
blastp_uniprot_sprot sp|Q5BH88|SPB1_EMENI 6 251 + 246 Gaps:18 30.77 806 38.31 4e-37 AdoMet-dependent rRNA methyltransferase spb1 OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN spb1 PE 3 SV 1
blastp_uniprot_sprot sp|P25582|SPB1_YEAST 6 221 + 216 Gaps:3 26.04 841 38.36 5e-37 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN SPB1 PE 1 SV 2
blastp_uniprot_sprot sp|Q4WVH3|SPB1_ASPFU 6 323 + 318 Gaps:45 43.14 795 32.94 6e-37 AdoMet-dependent rRNA methyltransferase spb1 OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN spb1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6FX63|SPB1_CANGA 6 281 + 276 Gaps:30 34.89 837 37.67 6e-36 AdoMet-dependent rRNA methyltransferase SPB1 OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN SPB1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6BNQ8|SPB1_DEBHA 6 485 + 480 Gaps:79 57.88 831 31.60 1e-35 AdoMet-dependent rRNA methyltransferase SPB1 OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN SPB1 PE 3 SV 2
rpsblast_cdd gnl|CDD|192857 78 233 + 156 Gaps:4 98.70 154 40.13 1e-31 pfam11861 DUF3381 Domain of unknown function (DUF3381). This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 156 to 174 amino acids in length. This domain is found associated with pfam07780 pfam01728.
rpsblast_cdd gnl|CDD|30641 5 51 + 47 none 22.93 205 42.55 9e-08 COG0293 FtsJ 23S rRNA methylase [Translation ribosomal structure and biogenesis].
rpsblast_cdd gnl|CDD|201939 6 48 + 43 Gaps:1 24.86 177 43.18 4e-07 pfam01728 FtsJ FtsJ-like methyltransferase. This family consists of FtsJ from various bacterial and archaeal sources FtsJ is a methyltransferase but actually has no effect on cell division. FtsJ's substrate is the 23S rRNA. The 1.5 A crystal structure of FtsJ in complex with its cofactor S-adenosylmethionine revealed that FtsJ has a methyltransferase fold. This family also includes the N terminus of flaviviral NS5 protein. It has been hypothesised that the N-terminal domain of NS5 is a methyltransferase involved in viral RNA capping.
rpsblast_kog gnl|CDD|36314 6 487 + 482 Gaps:34 57.95 780 32.96 8e-63 KOG1098 KOG1098 KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1 [RNA processing and modification General function prediction only].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 3 49 47 G3DSA:3.40.50.150 none none IPR029063
PANTHER 6 480 475 PTHR10920 none none IPR015507
Pfam 79 234 156 PF11861 none Domain of unknown function (DUF3381) IPR024576
PANTHER 6 480 475 PTHR10920:SF13 none none IPR028589
Pfam 5 47 43 PF01728 none FtsJ-like methyltransferase IPR002877

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting