Protein : Qrob_P0328930.2 Q. robur
Protein Identifier  ? Qrob_P0328930.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR11766 - TYROSYL-TRNA SYNTHETASE Code Enzyme  EC:6.1.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 192  
Kegg Orthology  K01866
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0004831 tyrosine-tRNA ligase activity Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H(+).

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100795726 21 188 + 168 Gaps:4 33.88 490 57.83 6e-48 probable tyrosine--tRNA ligase mitochondrial-like
blastp_kegg lcl|vvi:100246653 80 191 + 112 none 23.19 483 67.86 1e-46 tyrosyl-tRNA synthetase-like
blastp_kegg lcl|mdm:103402523 81 187 + 107 Gaps:3 22.63 486 72.73 3e-46 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|aly:ARALYDRAFT_477507 43 190 + 148 Gaps:13 28.38 511 57.93 3e-46 tRNA synthetase class I family protein
blastp_kegg lcl|mdm:103428949 81 187 + 107 Gaps:3 22.82 482 71.82 4e-46 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|mdm:103411042 81 187 + 107 Gaps:3 22.82 482 71.82 4e-46 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|pvu:PHAVU_008G249300g 81 188 + 108 Gaps:1 22.38 478 75.70 5e-46 hypothetical protein
blastp_kegg lcl|mus:103995193 57 188 + 132 Gaps:4 25.42 535 61.03 9e-46 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|pxb:103946319 81 187 + 107 Gaps:3 22.63 486 71.82 1e-45 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|pxb:103940367 18 187 + 170 Gaps:35 35.19 486 54.97 1e-45 probable tyrosine--tRNA ligase mitochondrial
blastp_pdb 1x8x_A 81 164 + 84 Gaps:1 26.40 322 51.76 1e-22 mol:protein length:322 Tyrosyl-tRNA synthetase
blastp_pdb 1vbm_B 81 164 + 84 Gaps:1 26.73 318 51.76 1e-22 mol:protein length:318 Tyrosyl-tRNA synthetase
blastp_pdb 1vbm_A 81 164 + 84 Gaps:1 26.73 318 51.76 1e-22 mol:protein length:318 Tyrosyl-tRNA synthetase
blastp_pdb 2yxn_A 81 164 + 84 Gaps:1 26.40 322 50.59 1e-21 mol:protein length:322 Tyrosyl-tRNA synthetase
blastp_pdb 1wq3_A 81 164 + 84 Gaps:1 26.40 322 50.59 1e-21 mol:protein length:322 Tyrosyl-tRNA synthetase
blastp_pdb 1wq4_A 81 164 + 84 Gaps:1 26.48 321 50.59 2e-21 mol:protein length:321 Tyrosyl-tRNA synthetase
blastp_pdb 1vbn_B 81 164 + 84 Gaps:1 26.73 318 50.59 2e-21 mol:protein length:318 Tyrosyl-tRNA synthetase
blastp_pdb 1vbn_A 81 164 + 84 Gaps:1 26.73 318 50.59 2e-21 mol:protein length:318 Tyrosyl-tRNA synthetase
blastp_pdb 1tyb_E 81 164 + 84 Gaps:1 26.65 319 48.24 1e-20 mol:protein length:319 TYROSYL-tRNA SYNTHETASE
blastp_pdb 1tya_E 81 164 + 84 Gaps:1 26.65 319 47.06 9e-20 mol:protein length:319 TYROSYL-tRNA SYNTHETASE
blastp_uniprot_sprot sp|Q6MC06|SYY_PARUW 81 190 + 110 Gaps:1 25.65 425 51.38 6e-32 Tyrosine--tRNA ligase OS Protochlamydia amoebophila (strain UWE25) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q650K7|SYY_BACFR 81 188 + 108 Gaps:1 24.88 430 45.79 1e-24 Tyrosine--tRNA ligase OS Bacteroides fragilis (strain YCH46) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q5LJ19|SYY_BACFN 81 188 + 108 Gaps:1 24.88 430 45.79 1e-24 Tyrosine--tRNA ligase OS Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|A5FMI1|SYY_FLAJ1 81 191 + 111 Gaps:1 25.52 431 45.45 1e-23 Tyrosine--tRNA ligase OS Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q54WD9|SYYM_DICDI 78 191 + 114 Gaps:16 26.97 482 40.77 2e-23 Probable tyrosine--tRNA ligase mitochondrial OS Dictyostelium discoideum GN mtyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q891D3|SYY_CLOTE 80 188 + 109 Gaps:1 27.03 407 40.00 7e-23 Tyrosine--tRNA ligase OS Clostridium tetani (strain Massachusetts / E88) GN tyrS PE 3 SV 2
blastp_uniprot_sprot sp|A6KZL8|SYY_BACV8 81 188 + 108 Gaps:1 24.88 430 43.93 9e-23 Tyrosine--tRNA ligase OS Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|A6GW04|SYY_FLAPJ 81 191 + 111 Gaps:1 25.52 431 43.64 1e-22 Tyrosine--tRNA ligase OS Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q7CQK7|SYY_SALTY 81 164 + 84 Gaps:1 20.05 424 52.94 2e-22 Tyrosine--tRNA ligase OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q8XG70|SYY_SALTI 81 164 + 84 Gaps:1 20.05 424 52.94 2e-22 Tyrosine--tRNA ligase OS Salmonella typhi GN tyrS PE 3 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 2 10 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 80 188 109 SSF52374 none none none
PANTHER 61 189 129 PTHR11766:SF0 none none none
Phobius 11 15 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 61 189 129 G3DSA:3.40.50.620 none none IPR014729
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 15 15 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 117 127 11 PS00178 "Reactome:REACT_71" Aminoacyl-transfer RNA synthetases class-I signature. IPR001412
Pfam 107 164 58 PF00579 "Reactome:REACT_71" tRNA synthetases class I (W and Y) IPR002305
PANTHER 61 189 129 PTHR11766 "KEGG:00970+6.1.1.1";signature_desc=TYROSYL-TRNA SYNTHETASE none IPR024088
Phobius 16 191 176 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 19 18

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting