Protein : Qrob_P0328440.2 Q. robur
Protein Identifier  ? Qrob_P0328440.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K15688 - E3 ubiquitin-protein ligase MUL1 [EC:2.3.2.27] Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 349  
Kegg Orthology  K15688
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0007005 mitochondrion organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103492702 2 348 + 347 Gaps:5 100.00 342 85.67 0.0 mitochondrial ubiquitin ligase activator of nfkb 1-A
blastp_kegg lcl|csv:101218196 2 348 + 347 Gaps:5 100.00 342 85.67 0.0 mitochondrial ubiquitin ligase activator of nfkb 1-like
blastp_kegg lcl|mdm:103449075 2 348 + 347 Gaps:5 100.00 342 84.21 0.0 mitochondrial ubiquitin ligase activator of nfkb 1-A
blastp_kegg lcl|pxb:103947546 2 348 + 347 Gaps:5 100.00 342 83.33 0.0 mitochondrial ubiquitin ligase activator of NFKB 1
blastp_kegg lcl|fve:101298960 2 348 + 347 Gaps:5 100.00 342 84.21 0.0 mitochondrial ubiquitin ligase activator of nfkb 1-A-like
blastp_kegg lcl|cic:CICLE_v10020955mg 2 348 + 347 Gaps:7 100.00 344 83.72 0.0 hypothetical protein
blastp_kegg lcl|cit:102629766 2 348 + 347 Gaps:7 100.00 344 83.72 0.0 mitochondrial ubiquitin ligase activator of nfkb 1-A-like
blastp_kegg lcl|pmum:103333804 2 348 + 347 Gaps:7 100.00 340 86.47 0.0 mitochondrial ubiquitin ligase activator of nfkb 1-A-like
blastp_kegg lcl|pper:PRUPE_ppa008230mg 2 348 + 347 Gaps:7 100.00 340 86.47 0.0 hypothetical protein
blastp_kegg lcl|gmx:100800734 2 348 + 347 Gaps:8 100.00 339 89.09 0.0 mitochondrial ubiquitin ligase activator of nfkb 1-like
blastp_pdb 2yho_G 290 346 + 57 Gaps:9 83.54 79 36.36 7e-10 mol:protein length:79 E3 UBIQUITIN-PROTEIN LIGASE MYLIP
blastp_pdb 2yho_E 290 346 + 57 Gaps:9 83.54 79 36.36 7e-10 mol:protein length:79 E3 UBIQUITIN-PROTEIN LIGASE MYLIP
blastp_pdb 2yho_C 290 346 + 57 Gaps:9 83.54 79 36.36 7e-10 mol:protein length:79 E3 UBIQUITIN-PROTEIN LIGASE MYLIP
blastp_pdb 2yho_A 290 346 + 57 Gaps:9 83.54 79 36.36 7e-10 mol:protein length:79 E3 UBIQUITIN-PROTEIN LIGASE MYLIP
blastp_pdb 2yhn_B 290 346 + 57 Gaps:9 83.54 79 36.36 7e-10 mol:protein length:79 E3 UBIQUITIN-PROTEIN LIGASE MYLIP
blastp_pdb 2yhn_A 290 346 + 57 Gaps:9 83.54 79 36.36 7e-10 mol:protein length:79 E3 UBIQUITIN-PROTEIN LIGASE MYLIP
blastp_pdb 3eb6_A 301 346 + 46 none 62.16 74 43.48 7e-08 mol:protein length:74 Baculoviral IAP repeat-containing protein 3
blastp_pdb 3eb5_A 301 346 + 46 none 62.16 74 43.48 7e-08 mol:protein length:74 Baculoviral IAP repeat-containing protein 3
blastp_pdb 3t6p_A 301 346 + 46 none 13.33 345 43.48 7e-08 mol:protein length:345 Baculoviral IAP repeat-containing protein 2
blastp_uniprot_sprot sp|Q969V5|MUL1_HUMAN 14 346 + 333 Gaps:32 93.47 352 29.18 4e-22 Mitochondrial ubiquitin ligase activator of NFKB 1 OS Homo sapiens GN MUL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q4R7G8|MUL1_MACFA 14 346 + 333 Gaps:32 93.47 352 28.88 6e-21 Mitochondrial ubiquitin ligase activator of NFKB 1 OS Macaca fascicularis GN MUL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6NTT6|MUL1_XENLA 14 346 + 333 Gaps:45 93.48 353 28.18 3e-19 Mitochondrial ubiquitin ligase activator of nfkb 1 OS Xenopus laevis GN mul1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VCM5|MUL1_MOUSE 12 346 + 335 Gaps:32 94.03 352 27.79 1e-18 Mitochondrial ubiquitin ligase activator of NFKB 1 OS Mus musculus GN Mul1 PE 2 SV 2
blastp_uniprot_sprot sp|Q5M7X9|MUL1A_DANRE 78 347 + 270 Gaps:27 74.78 341 29.41 6e-16 Mitochondrial ubiquitin ligase activator of nfkb 1-A OS Danio rerio GN mul1a PE 2 SV 1
blastp_uniprot_sprot sp|Q557E7|CBLA_DICDI 283 347 + 65 Gaps:3 9.32 665 40.32 1e-10 E3 ubiquitin-protein ligase cblA OS Dictyostelium discoideum GN cblA-1 PE 1 SV 1
blastp_uniprot_sprot sp|D3ZDI6|MYLIP_RAT 300 346 + 47 none 10.56 445 44.68 2e-09 E3 ubiquitin-protein ligase MYLIP OS Rattus norvegicus GN Mylip PE 2 SV 1
blastp_uniprot_sprot sp|Q8WY64|MYLIP_HUMAN 300 346 + 47 none 10.56 445 44.68 2e-09 E3 ubiquitin-protein ligase MYLIP OS Homo sapiens GN MYLIP PE 1 SV 2
blastp_uniprot_sprot sp|Q6TEM9|MYLIA_DANRE 282 346 + 65 Gaps:9 15.68 472 32.43 3e-09 E3 ubiquitin-protein ligase MYLIP-A OS Danio rerio GN mylipa PE 1 SV 2
blastp_uniprot_sprot sp|Q8BM54|MYLIP_MOUSE 300 346 + 47 none 10.56 445 44.68 5e-09 E3 ubiquitin-protein ligase MYLIP OS Mus musculus GN Mylip PE 1 SV 1
rpsblast_cdd gnl|CDD|152917 86 241 + 156 Gaps:6 98.70 154 46.05 2e-47 pfam12483 GIDE E3 Ubiquitin ligase. This domain family is found in bacteria archaea and eukaryotes and is typically between 150 and 163 amino acids in length. There is a single completely conserved residue E that may be functionally important. GIDE is an E3 ubiquitin ligase which is involved in inducing apoptosis.

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 292 342 51 G3DSA:3.30.40.10 none none IPR013083
PANTHER 1 347 347 PTHR12183 none none none
ProSiteProfiles 301 336 36 PS50089 none Zinc finger RING-type profile. IPR001841
Phobius 10 20 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 86 240 155 PF12483 "UniPathway:UPA00143" E3 Ubiquitin ligase IPR022170
Phobius 228 245 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 26 227 202 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 299 342 44 PF13920 none Zinc finger, C3HC4 type (RING finger) none
Phobius 246 348 103 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 300 342 43 SSF57850 none none none
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 21 25 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

1 Localization

Analysis Start End Length
SignalP_EUK 1 25 24

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting