Protein : Qrob_P0328190.2 Q. robur
Protein Identifier  ? Qrob_P0328190.2 Organism . Name  Quercus robur
Score  85.0 Score Type  egn
Protein Description  (M=2) PTHR11743:SF29 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 2-RELATED (PTHR11743:SF29) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 248  
Kegg Orthology  K15040
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005741 mitochondrial outer membrane The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103320426 12 247 + 236 none 85.20 277 80.51 2e-131 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|pper:PRUPE_ppa009796mg 12 247 + 236 none 85.20 277 80.51 6e-131 hypothetical protein
blastp_kegg lcl|mdm:103424662 11 247 + 237 none 85.56 277 76.37 4e-124 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|mdm:103415415 11 247 + 237 none 85.56 277 76.37 4e-124 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|tcc:TCM_034702 2 247 + 246 none 89.13 276 72.36 1e-123 Voltage dependent anion channel 2
blastp_kegg lcl|pxb:103951128 11 247 + 237 none 85.56 277 75.95 1e-123 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|pop:POPTR_0014s01660g 2 247 + 246 none 89.13 276 72.36 7e-123 POPTRDRAFT_823872 hypothetical protein
blastp_kegg lcl|fve:101312112 11 247 + 237 none 85.56 277 69.20 2e-116 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|csv:101222162 12 247 + 236 none 85.20 277 72.46 8e-116 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|cmo:103493604 12 247 + 236 none 85.20 277 70.76 2e-113 mitochondrial outer membrane protein porin 2-like
blastp_uniprot_sprot sp|Q9FJX3|VDAC2_ARATH 6 247 + 242 none 87.68 276 58.68 7e-97 Mitochondrial outer membrane protein porin 2 OS Arabidopsis thaliana GN VDAC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q84P97|VDAC5_ORYSJ 6 247 + 242 none 87.36 277 55.37 9e-88 Mitochondrial outer membrane protein porin 5 OS Oryza sativa subsp. japonica GN VDAC5 PE 2 SV 1
blastp_uniprot_sprot sp|P42056|VDAC2_SOLTU 6 247 + 242 none 87.68 276 46.28 1e-64 Mitochondrial outer membrane protein porin of 36 kDa OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|P42055|VDAC1_SOLTU 12 247 + 236 none 85.51 276 46.19 9e-62 Mitochondrial outer membrane protein porin of 34 kDa OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|P46274|VDAC1_WHEAT 11 247 + 237 Gaps:2 86.18 275 45.99 2e-60 Mitochondrial outer membrane porin OS Triticum aestivum GN VDAC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKM2|VDAC4_ARATH 18 247 + 230 Gaps:2 83.21 274 43.42 4e-59 Mitochondrial outer membrane protein porin 4 OS Arabidopsis thaliana GN VDAC4 PE 2 SV 1
blastp_uniprot_sprot sp|Q6K548|VDAC1_ORYSJ 11 247 + 237 Gaps:1 86.13 274 44.49 3e-58 Mitochondrial outer membrane protein porin 1 OS Oryza sativa subsp. japonica GN VDAC1 PE 1 SV 3
blastp_uniprot_sprot sp|P42054|VDAC_PEA 11 247 + 237 none 85.87 276 43.88 4e-58 Outer plastidial membrane protein porin OS Pisum sativum GN POR1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SMX3|VDAC3_ARATH 6 247 + 242 Gaps:4 87.59 274 43.33 1e-55 Mitochondrial outer membrane protein porin 3 OS Arabidopsis thaliana GN VDAC3 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SRH5|VDAC1_ARATH 11 247 + 237 none 85.87 276 43.88 1e-55 Mitochondrial outer membrane protein porin 1 OS Arabidopsis thaliana GN VDAC1 PE 1 SV 3
rpsblast_cdd gnl|CDD|132767 11 246 + 236 Gaps:10 86.96 276 36.67 1e-47 cd07306 Porin3_VDAC Voltage-dependent anion channel of the outer mitochondrial membrane. The voltage-dependent anion channel (VDAC) regulates the flux of mostly anionic metabolites through the outer mitochondrial membrane which is highly permeable to small molecules. VDAC is the most abundant protein in the outer membrane and membrane potentials can toggle VDAC between open or high-conducting and closed or low-conducting forms. VDAC binds to and is regulated in part by hexokinase an interaction that renders mitochondria less susceptible to pro-apoptotic signals most likely by intefering with VDAC's capability to respond to Bcl-2 family proteins. While VDAC appears to play a key role in mitochondrially induced cell death a proposed involvement in forming the mitochondrial permeability transition pore which is characteristic for damaged mitochondria and apoptosis has been challenged by more recent studies.
rpsblast_cdd gnl|CDD|201807 19 240 + 222 Gaps:9 82.72 272 42.22 2e-47 pfam01459 Porin_3 Eukaryotic porin.
rpsblast_kog gnl|CDD|38336 5 247 + 243 Gaps:11 88.26 281 29.44 4e-39 KOG3126 KOG3126 KOG3126 Porin/voltage-dependent anion-selective channel protein [Inorganic ion transport and metabolism].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 12 246 235 G3DSA:2.40.160.10 none none IPR023614
PANTHER 2 247 246 PTHR11743:SF29 none none none
PANTHER 2 247 246 PTHR11743 none none none
Pfam 17 240 224 PF01459 none Eukaryotic porin IPR027246

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting