Protein : Qrob_P0327560.2 Q. robur
Protein Identifier  ? Qrob_P0327560.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=2) PTHR12380//PTHR12380:SF19 - SYNTAXIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 253  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0005484 SNAP receptor activity Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100258582 1 244 + 244 Gaps:8 89.06 265 86.86 2e-146 syntaxin-71-like
blastp_kegg lcl|cic:CICLE_v100124841m 1 244 + 244 Gaps:8 90.77 260 86.44 3e-145 hypothetical protein
blastp_kegg lcl|cit:102607068 1 244 + 244 Gaps:8 89.06 265 86.44 3e-145 syntaxin-71-like
blastp_kegg lcl|cmo:103486468 1 244 + 244 Gaps:8 89.06 265 84.75 1e-144 syntaxin-71
blastp_kegg lcl|csv:101215905 1 244 + 244 Gaps:8 89.06 265 84.75 1e-144 syntaxin-71-like
blastp_kegg lcl|cmo:103500265 1 244 + 244 Gaps:8 89.06 265 84.75 3e-144 syntaxin-71-like
blastp_kegg lcl|csv:101219819 1 244 + 244 Gaps:8 89.06 265 84.32 4e-143 syntaxin-71-like
blastp_kegg lcl|pop:POPTR_0016s08960g 1 244 + 244 Gaps:8 89.06 265 86.02 6e-143 POPTRDRAFT_825249 Syntaxin 73 family protein
blastp_kegg lcl|gmx:100819272 1 244 + 244 Gaps:8 89.06 265 84.75 6e-143 syntaxin-71-like
blastp_kegg lcl|rcu:RCOM_1356980 1 244 + 244 Gaps:9 89.10 266 86.50 7e-143 syntaxin putative
blastp_uniprot_sprot sp|Q9SF29|SYP71_ARATH 1 244 + 244 Gaps:10 89.47 266 77.73 1e-130 Syntaxin-71 OS Arabidopsis thaliana GN SYP71 PE 1 SV 1
blastp_uniprot_sprot sp|Q94KK5|SYP73_ARATH 1 244 + 244 Gaps:15 89.35 263 69.79 1e-109 Syntaxin-73 OS Arabidopsis thaliana GN SYP73 PE 2 SV 1
blastp_uniprot_sprot sp|Q94KK6|SYP72_ARATH 1 244 + 244 Gaps:11 89.51 267 65.27 1e-100 Syntaxin-72 OS Arabidopsis thaliana GN SYP72 PE 2 SV 1
rpsblast_cdd gnl|CDD|203323 184 238 + 55 none 88.71 62 36.36 1e-08 pfam05739 SNARE SNARE domain. Most if not all vesicular membrane fusion events in eukaryotic cells are believed to be mediated by a conserved fusion machinery the SNARE [soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptors] machinery. The SNARE domain is thought to act as a protein-protein interaction module in the assembly of a SNARE protein complex.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 184 223 40 PS00914 "Reactome:REACT_11184" Syntaxin / epimorphin family signature. IPR006012
PANTHER 1 244 244 PTHR12380 none none none
PANTHER 1 244 244 PTHR12380:SF19 none none none
ProSiteProfiles 178 240 63 PS50192 none t-SNARE coiled-coil homology domain profile. IPR000727
Gene3D 184 239 56 G3DSA:1.20.5.110 none none none
Coils 40 68 29 Coil none none none
SMART 173 240 68 SM00397 none Helical region found in SNAREs IPR000727
SUPERFAMILY 184 238 55 SSF58038 none none none
Pfam 184 241 58 PF05739 none SNARE domain IPR000727

0 Localization

0 Qtllist

0 Targeting