5 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005524 | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
GO:0003777 | microtubule motor activity | Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP). |
GO:0007018 | microtubule-based movement | A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules. |
GO:0008017 | microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
GO:0005871 | kinesin complex | Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work. |
50 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pmum:103335430 | 1 | 3041 | + | 3041 | Gaps:94 | 100.00 | 2967 | 68.96 | 0.0 | phragmoplast orienting kinesin 2 |
blastp_kegg | lcl|vvi:100255624 | 1 | 3041 | + | 3041 | Gaps:112 | 100.00 | 2959 | 69.85 | 0.0 | uncharacterized LOC100255624 |
blastp_kegg | lcl|cit:102615914 | 1 | 3041 | + | 3041 | Gaps:63 | 100.00 | 2992 | 66.18 | 0.0 | phragmoplast orienting kinesin 2-like |
blastp_kegg | lcl|pper:PRUPE_ppa000013mg | 23 | 3041 | + | 3019 | Gaps:133 | 100.00 | 2918 | 69.33 | 0.0 | hypothetical protein |
blastp_kegg | lcl|rcu:RCOM_0773970 | 1 | 3040 | + | 3040 | Gaps:118 | 99.87 | 2970 | 67.80 | 0.0 | ATP binding protein putative |
blastp_kegg | lcl|pxb:103968003 | 1 | 3041 | + | 3041 | Gaps:119 | 100.00 | 2990 | 67.06 | 0.0 | phragmoplast orienting kinesin 2-like |
blastp_kegg | lcl|pxb:103967987 | 1 | 3041 | + | 3041 | Gaps:109 | 100.00 | 2980 | 67.25 | 0.0 | phragmoplast orienting kinesin 2-like |
blastp_kegg | lcl|mdm:103402281 | 1 | 3041 | + | 3041 | Gaps:119 | 100.00 | 2972 | 67.56 | 0.0 | phragmoplast orienting kinesin 2 |
blastp_kegg | lcl|cic:CICLE_v10027659mg | 35 | 3041 | + | 3007 | Gaps:110 | 99.73 | 2913 | 66.47 | 0.0 | hypothetical protein |
blastp_kegg | lcl|cmo:103498414 | 1 | 3041 | + | 3041 | Gaps:168 | 100.00 | 2927 | 64.06 | 0.0 | phragmoplast orienting kinesin 2 |
blastp_pdb | 3b6u_B | 222 | 567 | + | 346 | Gaps:26 | 91.40 | 372 | 48.24 | 3e-82 | mol:protein length:372 Kinesin-like protein KIF3B |
blastp_pdb | 3b6u_A | 222 | 567 | + | 346 | Gaps:26 | 91.40 | 372 | 48.24 | 3e-82 | mol:protein length:372 Kinesin-like protein KIF3B |
blastp_pdb | 3gbj_C | 222 | 556 | + | 335 | Gaps:41 | 97.74 | 354 | 43.93 | 7e-77 | mol:protein length:354 KIF13B protein |
blastp_pdb | 3gbj_B | 222 | 556 | + | 335 | Gaps:41 | 97.74 | 354 | 43.93 | 7e-77 | mol:protein length:354 KIF13B protein |
blastp_pdb | 3gbj_A | 222 | 556 | + | 335 | Gaps:41 | 97.74 | 354 | 43.93 | 7e-77 | mol:protein length:354 KIF13B protein |
blastp_pdb | 1goj_A | 220 | 565 | + | 346 | Gaps:36 | 93.52 | 355 | 45.78 | 3e-76 | mol:protein length:355 KINESIN HEAVY CHAIN |
blastp_pdb | 2hxh_C | 210 | 565 | + | 356 | Gaps:38 | 93.40 | 394 | 42.12 | 1e-75 | mol:protein length:394 Kinesin-like protein KIF1A |
blastp_pdb | 2hxf_C | 210 | 565 | + | 356 | Gaps:38 | 93.40 | 394 | 42.12 | 1e-75 | mol:protein length:394 Kinesin-like protein KIF1A |
blastp_pdb | 1ia0_K | 210 | 565 | + | 356 | Gaps:38 | 93.40 | 394 | 42.12 | 1e-75 | mol:protein length:394 KINESIN-LIKE PROTEIN KIF1A |
blastp_pdb | 1i5s_A | 222 | 565 | + | 344 | Gaps:38 | 97.00 | 367 | 42.98 | 1e-75 | mol:protein length:367 KINESIN-LIKE PROTEIN KIF1A |
blastp_uniprot_sprot | sp|Q27IK6|POK2_ARATH | 1 | 3041 | + | 3041 | Gaps:175 | 100.00 | 2771 | 56.59 | 0.0 | Phragmoplast orienting kinesin 2 OS Arabidopsis thaliana GN POK2 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q27IK7|POK1_ARATH | 38 | 2919 | + | 2882 | Gaps:156 | 78.65 | 2066 | 46.77 | 0.0 | Phragmoplast orienting kinesin-1 OS Arabidopsis thaliana GN POK1 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9GYZ0|KIF15_STRPU | 222 | 760 | + | 539 | Gaps:29 | 35.54 | 1463 | 45.38 | 1e-122 | Kinesin-like protein KIF15 OS Strongylocentrotus purpuratus GN KIF15 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9NS87|KIF15_HUMAN | 222 | 802 | + | 581 | Gaps:72 | 39.55 | 1388 | 46.81 | 3e-119 | Kinesin-like protein KIF15 OS Homo sapiens GN KIF15 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q6P9L6|KIF15_MOUSE | 222 | 760 | + | 539 | Gaps:55 | 36.19 | 1387 | 48.01 | 7e-117 | Kinesin-like protein KIF15 OS Mus musculus GN Kif15 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9LDN0|KN12A_ARATH | 215 | 794 | + | 580 | Gaps:13 | 40.56 | 1292 | 50.38 | 1e-116 | Kinesin-like protein KIN12A OS Arabidopsis thaliana GN KIN12A PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q498L9|KI15B_XENLA | 219 | 759 | + | 541 | Gaps:55 | 36.63 | 1387 | 47.83 | 1e-115 | Kinesin-like protein KIF15-B OS Xenopus laevis GN kif15-b PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q91785|KI15A_XENLA | 219 | 760 | + | 542 | Gaps:54 | 36.74 | 1388 | 48.43 | 8e-115 | Kinesin-like protein KIF15-A OS Xenopus laevis GN kif15-a PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q7TSP2|KIF15_RAT | 222 | 760 | + | 539 | Gaps:55 | 36.25 | 1385 | 47.01 | 9e-115 | Kinesin-like protein KIF15 OS Rattus norvegicus GN Kif15 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q8L7Y8|KN12B_ARATH | 219 | 787 | + | 569 | Gaps:13 | 39.07 | 1313 | 50.29 | 1e-112 | Kinesin-like protein KIN12B OS Arabidopsis thaliana GN KIN12B PE 1 SV 1 |
47 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Coils | 985 | 1020 | 36 | Coil | none | none | none |
Coils | 1923 | 1944 | 22 | Coil | none | none | none |
Coils | 1499 | 1527 | 29 | Coil | none | none | none |
Coils | 2115 | 2143 | 29 | Coil | none | none | none |
Coils | 1038 | 1059 | 22 | Coil | none | none | none |
PANTHER | 817 | 1268 | 452 | PTHR24115 | none | none | IPR027640 |
PANTHER | 657 | 676 | 20 | PTHR24115 | none | none | IPR027640 |
PANTHER | 694 | 737 | 44 | PTHR24115 | none | none | IPR027640 |
Coils | 2836 | 2864 | 29 | Coil | none | none | none |
Coils | 943 | 978 | 36 | Coil | none | none | none |
Coils | 819 | 861 | 43 | Coil | none | none | none |
Coils | 2213 | 2234 | 22 | Coil | none | none | none |
Coils | 2164 | 2199 | 36 | Coil | none | none | none |
Coils | 2522 | 2634 | 113 | Coil | none | none | none |
PANTHER | 817 | 1268 | 452 | PTHR24115:SF417 | none | none | none |
PANTHER | 694 | 737 | 44 | PTHR24115:SF417 | none | none | none |
Coils | 652 | 687 | 36 | Coil | none | none | none |
Coils | 1264 | 1285 | 22 | Coil | none | none | none |
Pfam | 227 | 558 | 332 | PF00225 | none | Kinesin motor domain | IPR001752 |
SUPERFAMILY | 221 | 591 | 371 | SSF52540 | none | none | IPR027417 |
Coils | 2780 | 2829 | 50 | Coil | none | none | none |
Coils | 2466 | 2487 | 22 | Coil | none | none | none |
ProSiteProfiles | 221 | 558 | 338 | PS50067 | none | Kinesin motor domain profile. | IPR001752 |
SMART | 219 | 566 | 348 | SM00129 | none | Kinesin motor, catalytic domain. ATPase. | IPR001752 |
Coils | 2873 | 2915 | 43 | Coil | none | none | none |
Pfam | 697 | 782 | 86 | PF12711 | none | Kinesin motor | IPR024658 |
Coils | 2976 | 3004 | 29 | Coil | none | none | none |
Coils | 572 | 593 | 22 | Coil | none | none | none |
PANTHER | 200 | 600 | 401 | PTHR24115:SF417 | none | none | none |
Gene3D | 219 | 567 | 349 | G3DSA:3.40.850.10 | none | none | IPR001752 |
1 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran1_2003_QTL2_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1B0H8U_259 | s_1CB1VL_554 | 17 | 0 | 87 | lod | 3,3 | 8,7 |