3 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005524 | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
GO:0003774 | motor activity | Catalysis of the generation of force resulting either in movement along a microfilament or microtubule, or in torque resulting in membrane scission, coupled to the hydrolysis of a nucleoside triphosphate. |
GO:0016459 | myosin complex | A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes. |
46 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|cmo:103492348 | 1 | 645 | + | 645 | Gaps:30 | 40.22 | 1529 | 92.03 | 0.0 | myosin-17-like |
blastp_kegg | lcl|pop:POPTR_0006s14790g | 2 | 645 | + | 644 | Gaps:30 | 39.90 | 1539 | 92.51 | 0.0 | POPTRDRAFT_561027 hypothetical protein |
blastp_kegg | lcl|rcu:RCOM_1046280 | 6 | 645 | + | 640 | Gaps:30 | 39.77 | 1534 | 93.11 | 0.0 | myosin XI putative |
blastp_kegg | lcl|cit:102629173 | 1 | 645 | + | 645 | Gaps:30 | 40.20 | 1530 | 91.71 | 0.0 | myosin-17-like |
blastp_kegg | lcl|vvi:100243893 | 1 | 645 | + | 645 | Gaps:30 | 37.57 | 1637 | 91.54 | 0.0 | myosin-Vb-like |
blastp_kegg | lcl|vvi:100266890 | 1 | 645 | + | 645 | Gaps:30 | 39.94 | 1540 | 90.41 | 0.0 | myosin-H heavy chain-like |
blastp_kegg | lcl|eus:EUTSA_v10012431mg | 1 | 645 | + | 645 | Gaps:30 | 40.17 | 1531 | 89.43 | 0.0 | hypothetical protein |
blastp_kegg | lcl|pda:103696269 | 1 | 645 | + | 645 | Gaps:30 | 40.20 | 1530 | 90.08 | 0.0 | myosin-17-like |
blastp_kegg | lcl|cic:CICLE_v10007325mg | 1 | 645 | + | 645 | Gaps:30 | 59.65 | 1031 | 91.54 | 0.0 | hypothetical protein |
blastp_kegg | lcl|gmx:100804820 | 1 | 645 | + | 645 | Gaps:30 | 40.20 | 1530 | 92.03 | 0.0 | myosin-17-like |
blastp_pdb | 3mkd_A | 63 | 645 | + | 583 | Gaps:43 | 80.06 | 692 | 49.28 | 1e-176 | mol:protein length:692 Myosin-2 heavy chain |
blastp_pdb | 1w9j_A | 63 | 645 | + | 583 | Gaps:43 | 71.95 | 770 | 49.28 | 3e-175 | mol:protein length:770 MYOSIN II HEAVY CHAIN |
blastp_pdb | 1w9i_A | 63 | 645 | + | 583 | Gaps:43 | 71.95 | 770 | 49.28 | 4e-175 | mol:protein length:770 MYOSIN II HEAVY CHAIN |
blastp_pdb | 2y9e_X | 63 | 645 | + | 583 | Gaps:43 | 73.09 | 758 | 49.10 | 2e-174 | mol:protein length:758 MYOSIN-2 |
blastp_pdb | 2y8i_X | 63 | 645 | + | 583 | Gaps:43 | 73.09 | 758 | 49.10 | 2e-174 | mol:protein length:758 MYOSIN-2 HEAVY CHAIN |
blastp_pdb | 2y0r_X | 63 | 645 | + | 583 | Gaps:43 | 73.09 | 758 | 49.10 | 2e-174 | mol:protein length:758 MYOSIN-2 HEAVY CHAIN |
blastp_pdb | 1d1c_A | 63 | 645 | + | 583 | Gaps:43 | 72.80 | 761 | 49.10 | 3e-174 | mol:protein length:761 MYOSIN |
blastp_pdb | 1d1b_A | 63 | 645 | + | 583 | Gaps:43 | 72.80 | 761 | 49.10 | 3e-174 | mol:protein length:761 MYOSIN |
blastp_pdb | 1d1a_A | 63 | 645 | + | 583 | Gaps:43 | 72.80 | 761 | 49.10 | 3e-174 | mol:protein length:761 MYOSIN |
blastp_pdb | 1d0z_A | 63 | 645 | + | 583 | Gaps:43 | 72.80 | 761 | 49.10 | 3e-174 | mol:protein length:761 MYOSIN |
blastp_uniprot_sprot | sp|F4K5J1|MYO17_ARATH | 1 | 645 | + | 645 | Gaps:30 | 40.17 | 1531 | 88.62 | 0.0 | Myosin-17 OS Arabidopsis thaliana GN XI-K PE 2 SV 2 |
blastp_uniprot_sprot | sp|F4HWY6|MYO11_ARATH | 4 | 640 | + | 637 | Gaps:30 | 39.70 | 1529 | 83.86 | 0.0 | Myosin-11 OS Arabidopsis thaliana GN XI-E PE 3 SV 1 |
blastp_uniprot_sprot | sp|F4HXP9|MYO9_ARATH | 9 | 640 | + | 632 | Gaps:30 | 39.14 | 1538 | 83.72 | 0.0 | Myosin-9 OS Arabidopsis thaliana GN XI-C PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q39160|MYO5_ARATH | 1 | 645 | + | 645 | Gaps:33 | 40.26 | 1520 | 83.99 | 0.0 | Myosin-5 OS Arabidopsis thaliana GN XI-1 PE 1 SV 1 |
blastp_uniprot_sprot | sp|F4IRU3|MYO12_ARATH | 1 | 645 | + | 645 | Gaps:30 | 39.52 | 1556 | 78.37 | 0.0 | Myosin-12 OS Arabidopsis thaliana GN XI-F PE 2 SV 1 |
blastp_uniprot_sprot | sp|F4I460|MYO8_ARATH | 1 | 645 | + | 645 | Gaps:32 | 41.00 | 1500 | 76.10 | 0.0 | Myosin-8 OS Arabidopsis thaliana GN XI-B PE 3 SV 1 |
blastp_uniprot_sprot | sp|Q9LKB9|MYO6_ARATH | 1 | 645 | + | 645 | Gaps:31 | 40.80 | 1505 | 76.22 | 0.0 | Myosin-6 OS Arabidopsis thaliana GN XI-2 PE 1 SV 1 |
blastp_uniprot_sprot | sp|F4I5Q6|MYO7_ARATH | 1 | 645 | + | 645 | Gaps:31 | 35.49 | 1730 | 77.04 | 0.0 | Myosin-7 OS Arabidopsis thaliana GN XI-A PE 3 SV 1 |
blastp_uniprot_sprot | sp|Q9M2K0|MYO16_ARATH | 5 | 640 | + | 636 | Gaps:31 | 48.71 | 1242 | 78.02 | 0.0 | Myosin-16 OS Arabidopsis thaliana GN XI-J PE 2 SV 1 |
blastp_uniprot_sprot | sp|F4IUG9|MYO13_ARATH | 7 | 645 | + | 639 | Gaps:31 | 40.72 | 1493 | 74.34 | 0.0 | Myosin-13 OS Arabidopsis thaliana GN XI-G PE 3 SV 1 |
17 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
PANTHER | 1 | 213 | 213 | PTHR13140 | none | none | none |
PANTHER | 1 | 213 | 213 | PTHR13140:SF256 | none | none | none |
PANTHER | 244 | 640 | 397 | PTHR13140 | none | none | none |
PANTHER | 244 | 640 | 397 | PTHR13140:SF256 | none | none | none |
Pfam | 64 | 214 | 151 | PF00063 | none | Myosin head (motor domain) | IPR001609 |
Pfam | 242 | 624 | 383 | PF00063 | none | Myosin head (motor domain) | IPR001609 |
SMART | 56 | 648 | 593 | SM00242 | none | Myosin. Large ATPases. | IPR001609 |
Gene3D | 150 | 186 | 37 | G3DSA:3.40.50.300 | none | none | IPR027417 |
ProSiteProfiles | 62 | 649 | 588 | PS51456 | none | Myosin motor domain profile. | IPR001609 |
SUPERFAMILY | 243 | 641 | 399 | SSF52540 | none | none | IPR027417 |
SUPERFAMILY | 23 | 212 | 190 | SSF52540 | none | none | IPR027417 |
PRINTS | 149 | 174 | 26 | PR00193 | none | Myosin heavy chain signature | IPR001609 |
PRINTS | 459 | 487 | 29 | PR00193 | none | Myosin heavy chain signature | IPR001609 |
PRINTS | 512 | 540 | 29 | PR00193 | none | Myosin heavy chain signature | IPR001609 |
PRINTS | 196 | 223 | 28 | PR00193 | none | Myosin heavy chain signature | IPR001609 |
PRINTS | 92 | 111 | 20 | PR00193 | none | Myosin heavy chain signature | IPR001609 |
Pfam | 11 | 47 | 37 | PF02736 | none | Myosin N-terminal SH3-like domain | IPR004009 |
9 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran1_2003_QTL2_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1B0H8U_259 | s_1CB1VL_554 | 17 | 0 | 87 | lod | 3,3 | 8,7 |
Bourran2_2004_QTL9_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1C34E9_788 | v_12238_322 | 50 | 25 | 75 | lod | 4,4 | 10,1 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf | Qrob_Chr02 | 2 | s_1AQA4Z_1644 | s_1AK5QX_947 | 53.67 | 14,01 | 79,68 | lod | 5.6594 | 0.03 |
Bourran1_2004_QTL2_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1AW12F_382 | s_1A77MR_223 | 42 | 6 | 64 | lod | 3,6 | 9,6 |
Bourran_2000_2002_QTL2_Delta.F | Qrob_Chr02 | 2 | s_1CSO13_1244 | s_1AVEUF_1540 | 55.44 | 46,71 | 63,68 | lod | 7.3232 | 0.058 |
Bourran2_2002_QTL9_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1BFNDA_375 | s_1A3VA1_2139 | 32,5 | 17 | 62 | lod | 3,1 | 4,2 |
Bourran2_2003_QTL8_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1ANG6_1446 | v_11270_161 | 40 | 0 | 72 | lod | 4,4 | 9,9 |
Bourran2_2014_nP_A4 | Qrob_Chr11 | 11 | s_1B58GB_1413 | s_1A5BYY_1671 | 11,15 | 0 | 42,38 | lod | 1,8913 | 4,5 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf | Qrob_Chr02 | 2 | s_1AEP21_172 | v_6048_204 | 46.33 | 22,5 | 65,23 | lod | 4.972 | 0.03 |