Protein : Qrob_P0322880.2 Q. robur
Protein Identifier  ? Qrob_P0322880.2 Organism . Name  Quercus robur
Score  11.3 Score Type  egn
Protein Description  (M=1) 4.1.99.17 - Phosphomethylpyrimidine synthase. Code Enzyme  EC:4.1.99.17
Gene Prediction Quality  validated Protein length 

Sequence

Length: 651  
Kegg Orthology  K03147
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0051536 iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
GO:0009228 thiamine biosynthetic process The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_041663 1 650 + 650 Gaps:2 100.00 648 92.28 0.0 ThiaminC isoform 1
blastp_kegg lcl|pmum:103320548 1 650 + 650 Gaps:2 100.00 648 91.36 0.0 phosphomethylpyrimidine synthase chloroplastic
blastp_kegg lcl|fve:101314730 1 650 + 650 Gaps:5 100.00 651 91.09 0.0 phosphomethylpyrimidine synthase chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10027988mg 1 649 + 649 Gaps:8 99.23 646 91.42 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa002651mg 1 650 + 650 Gaps:2 100.00 648 91.36 0.0 hypothetical protein
blastp_kegg lcl|pxb:103963218 1 650 + 650 Gaps:2 99.39 652 91.20 0.0 phosphomethylpyrimidine synthase chloroplastic-like
blastp_kegg lcl|mdm:103418935 1 650 + 650 Gaps:2 99.39 652 90.74 0.0 phosphomethylpyrimidine synthase chloroplastic-like
blastp_kegg lcl|pxb:103938583 1 650 + 650 Gaps:2 100.00 648 90.59 0.0 phosphomethylpyrimidine synthase chloroplastic
blastp_kegg lcl|mdm:103447435 1 650 + 650 Gaps:2 100.00 648 90.43 0.0 phosphomethylpyrimidine synthase chloroplastic
blastp_kegg lcl|pvu:PHAVU_006G065300g 1 650 + 650 Gaps:2 99.69 650 89.51 0.0 hypothetical protein
blastp_pdb 3epo_B 98 640 + 543 Gaps:92 96.57 612 61.08 0.0 mol:protein length:612 Thiamine biosynthesis protein thiC
blastp_pdb 3epo_A 98 640 + 543 Gaps:92 96.57 612 61.08 0.0 mol:protein length:612 Thiamine biosynthesis protein thiC
blastp_pdb 3epn_B 98 640 + 543 Gaps:92 96.57 612 61.08 0.0 mol:protein length:612 Thiamine biosynthesis protein thiC
blastp_pdb 3epn_A 98 640 + 543 Gaps:92 96.57 612 61.08 0.0 mol:protein length:612 Thiamine biosynthesis protein thiC
blastp_pdb 3epm_B 98 640 + 543 Gaps:92 96.57 612 61.08 0.0 mol:protein length:612 Thiamine biosynthesis protein thiC
blastp_pdb 3epm_A 98 640 + 543 Gaps:92 96.57 612 61.08 0.0 mol:protein length:612 Thiamine biosynthesis protein thiC
blastp_uniprot_sprot sp|O82392|THIC_ARATH 2 650 + 649 Gaps:7 99.69 644 87.54 0.0 Phosphomethylpyrimidine synthase chloroplastic OS Arabidopsis thaliana GN THIC PE 1 SV 1
blastp_uniprot_sprot sp|Q9KBJ4|THIC_BACHD 78 622 + 545 Gaps:66 98.66 595 64.74 0.0 Phosphomethylpyrimidine synthase OS Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN thiC PE 3 SV 1
blastp_uniprot_sprot sp|A7GUZ5|THIC_BACCN 94 622 + 529 Gaps:50 97.10 586 64.50 0.0 Phosphomethylpyrimidine synthase OS Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN thiC PE 3 SV 1
blastp_uniprot_sprot sp|A4VR38|THIC_PSEU5 96 619 + 524 Gaps:80 95.06 627 62.25 0.0 Phosphomethylpyrimidine synthase OS Pseudomonas stutzeri (strain A1501) GN thiC PE 3 SV 1
blastp_uniprot_sprot sp|A6VD86|THIC_PSEA7 96 619 + 524 Gaps:80 95.06 627 62.08 0.0 Phosphomethylpyrimidine synthase OS Pseudomonas aeruginosa (strain PA7) GN thiC PE 3 SV 1
blastp_uniprot_sprot sp|Q603T9|THIC_METCA 117 620 + 504 Gaps:75 92.47 624 64.12 0.0 Phosphomethylpyrimidine synthase OS Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN thiC PE 3 SV 1
blastp_uniprot_sprot sp|C5BTK7|THIC_TERTT 96 609 + 514 Gaps:87 92.80 639 62.39 0.0 Phosphomethylpyrimidine synthase OS Teredinibacter turnerae (strain ATCC 39867 / T7901) GN thiC PE 3 SV 1
blastp_uniprot_sprot sp|Q9HUJ2|THIC_PSEAE 96 619 + 524 Gaps:80 95.06 627 61.91 0.0 Phosphomethylpyrimidine synthase OS Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN thiC PE 3 SV 1
blastp_uniprot_sprot sp|B7V362|THIC_PSEA8 96 619 + 524 Gaps:80 95.06 627 61.91 0.0 Phosphomethylpyrimidine synthase OS Pseudomonas aeruginosa (strain LESB58) GN thiC PE 3 SV 1
blastp_uniprot_sprot sp|A4XPW1|THIC_PSEMY 96 621 + 526 Gaps:80 95.37 627 62.04 0.0 Phosphomethylpyrimidine synthase OS Pseudomonas mendocina (strain ymp) GN thiC PE 3 SV 1
rpsblast_cdd gnl|CDD|178063 8 650 + 643 Gaps:2 99.84 642 88.61 0.0 PLN02444 PLN02444 HMP-P synthase.
rpsblast_cdd gnl|CDD|181756 98 642 + 545 Gaps:96 97.03 607 65.53 0.0 PRK09284 PRK09284 thiamine biosynthesis protein ThiC Provisional.
rpsblast_cdd gnl|CDD|202065 170 593 + 424 Gaps:7 100.00 421 59.86 0.0 pfam01964 ThiC ThiC family. ThiC is found within the thiamine biosynthesis operon. ThiC is involved in pyrimidine biosynthesis. The precise catalytic function of ThiC is still not known. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR an intermediate in the de novo pyrimidine biosynthesis.
rpsblast_cdd gnl|CDD|30771 170 596 + 427 Gaps:3 99.07 432 67.76 0.0 COG0422 ThiC Thiamine biosynthesis protein ThiC [Coenzyme metabolism].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 98 163 66 PF13667 "KEGG:00730+4.1.99.17","MetaCyc:PWY-6890","UniPathway:UPA00060" ThiC-associated domain IPR025747
Pfam 170 592 423 PF01964 "KEGG:00730+4.1.99.17","MetaCyc:PWY-6890","UniPathway:UPA00060" ThiC family IPR002817
PANTHER 76 646 571 PTHR30557:SF1 none none none
TIGRFAM 170 593 424 TIGR00190 "KEGG:00730+4.1.99.17","MetaCyc:PWY-6890","UniPathway:UPA00060" thiC: phosphomethylpyrimidine synthase IPR002817
PANTHER 76 646 571 PTHR30557 none none none

0 Localization

0 Qtllist

0 Targeting