Protein : Qrob_P0320680.2 Q. robur

Protein Identifier  ? Qrob_P0320680.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR31062:SF1 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED (PTHR31062:SF1) Code Enzyme  EC:2.4.1.207
Gene Prediction Quality  validated Protein length 

Sequence

Length: 335  
Kegg Orthology  K08235

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

8 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0010411 xyloglucan metabolic process The chemical reactions and pathways involving xyloglucan, the cross-linking glycan composed of (1->4)-beta-D-glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants.
GO:0006073 cellular glucan metabolic process The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues.
GO:0016762 xyloglucan:xyloglucosyl transferase activity Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.
GO:0048046 apoplast The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
GO:0042546 cell wall biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103320978 1 332 + 332 Gaps:2 99.70 335 82.34 0.0 probable xyloglucan endotransglucosylase/hydrolase protein 28
blastp_kegg lcl|gmx:100778185 5 333 + 329 Gaps:3 98.22 338 78.01 0.0 probable xyloglucan endotransglucosylase/hydrolase protein 28-like
blastp_kegg lcl|pxb:103943109 1 334 + 334 Gaps:2 100.00 336 80.65 0.0 probable xyloglucan endotransglucosylase/hydrolase protein 28
blastp_kegg lcl|pper:PRUPE_ppa008275mg 1 329 + 329 Gaps:2 97.93 338 82.18 0.0 hypothetical protein
blastp_kegg lcl|mdm:103429442 1 334 + 334 Gaps:2 100.00 336 80.36 0.0 probable xyloglucan endotransglucosylase/hydrolase protein 28
blastp_kegg lcl|mdm:103451515 1 334 + 334 Gaps:2 100.00 336 80.06 0.0 probable xyloglucan endotransglucosylase/hydrolase protein 28
blastp_kegg lcl|pop:POPTR_0008s13780g 1 332 + 332 Gaps:3 99.70 336 80.30 0.0 POPTRDRAFT_720800 xyloglucan endotransglycosylase family protein
blastp_kegg lcl|csv:101227667 1 333 + 333 none 100.00 333 75.98 0.0 probable xyloglucan endotransglucosylase/hydrolase protein 28-like
blastp_kegg lcl|pop:POPTR_0010s11280g 1 332 + 332 Gaps:3 99.70 336 79.70 0.0 POPTRDRAFT_658681 xyloglucan endotransglycosylase family protein
blastp_kegg lcl|cmo:103504326 1 333 + 333 none 100.00 333 75.98 0.0 probable xyloglucan endotransglucosylase/hydrolase protein 28
blastp_pdb 2uwc_B 31 291 + 261 Gaps:14 94.10 271 45.88 8e-70 mol:protein length:271 CELLULASE
blastp_pdb 2uwc_A 31 291 + 261 Gaps:14 94.10 271 45.88 8e-70 mol:protein length:271 CELLULASE
blastp_pdb 2uwa_C 31 291 + 261 Gaps:14 93.07 274 45.49 2e-69 mol:protein length:274 CELLULASE
blastp_pdb 2uwa_B 31 291 + 261 Gaps:14 93.07 274 45.49 2e-69 mol:protein length:274 CELLULASE
blastp_pdb 2uwa_A 31 291 + 261 Gaps:14 93.07 274 45.49 2e-69 mol:protein length:274 CELLULASE
blastp_pdb 2uwb_B 31 291 + 261 Gaps:13 93.63 267 45.60 4e-68 mol:protein length:267 CELLULASE
blastp_pdb 2uwb_A 31 291 + 261 Gaps:13 93.63 267 45.60 4e-68 mol:protein length:267 CELLULASE
blastp_pdb 2vh9_B 31 291 + 261 Gaps:13 86.21 290 45.60 5e-68 mol:protein length:290 CELLULASE
blastp_pdb 2vh9_A 31 291 + 261 Gaps:13 86.21 290 45.60 5e-68 mol:protein length:290 CELLULASE
blastp_pdb 1un1_B 31 291 + 261 Gaps:7 92.81 278 37.60 2e-54 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_uniprot_sprot sp|Q38909|XTH28_ARATH 6 332 + 327 Gaps:4 99.70 332 68.88 3e-169 Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS Arabidopsis thaliana GN XTH28 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LDS2|XTH27_ARATH 20 334 + 315 Gaps:2 95.20 333 71.29 5e-164 Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS Arabidopsis thaliana GN XTH27 PE 2 SV 2
blastp_uniprot_sprot sp|Q38908|XTH30_ARATH 4 310 + 307 Gaps:5 89.80 343 55.84 8e-120 Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS Arabidopsis thaliana GN XTH30 PE 2 SV 2
blastp_uniprot_sprot sp|Q8L7H3|XTH29_ARATH 26 320 + 295 Gaps:19 85.71 357 54.90 9e-111 Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS Arabidopsis thaliana GN XTH29 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LC45|XTH33_ARATH 10 291 + 282 Gaps:26 97.42 310 43.05 1e-83 Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS Arabidopsis thaliana GN XTH33 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SV60|XTH2_ARATH 11 294 + 284 Gaps:10 96.58 292 45.04 2e-75 Xyloglucan endotransglucosylase/hydrolase protein 2 OS Arabidopsis thaliana GN XTH2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SV61|XTH1_ARATH 5 294 + 290 Gaps:11 98.97 292 40.83 3e-73 Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS Arabidopsis thaliana GN XTH1 PE 3 SV 2
blastp_uniprot_sprot sp|Q9LJR7|XTH3_ARATH 8 291 + 284 Gaps:10 96.55 290 40.71 1e-68 Xyloglucan endotransglucosylase/hydrolase protein 3 OS Arabidopsis thaliana GN XTH3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XIW1|XTH5_ARATH 6 291 + 286 Gaps:15 97.95 293 39.37 5e-65 Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS Arabidopsis thaliana GN XTH5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LF99|XTH6_ARATH 4 291 + 288 Gaps:9 96.92 292 41.34 1e-63 Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS Arabidopsis thaliana GN XTH6 PE 2 SV 2

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 37 217 181 PF00722 none Glycosyl hydrolases family 16 IPR000757
PANTHER 19 297 279 PTHR31062:SF1 none none none
PIRSF 2 296 295 PIRSF005604 none none IPR016455
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 31 294 264 G3DSA:2.60.120.200 none none IPR013320
PANTHER 19 297 279 PTHR31062 none none none
Phobius 6 18 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 24 334 311 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 32 294 263 SSF49899 none none IPR013320
Pfam 256 291 36 PF06955 none Xyloglucan endo-transglycosylase (XET) C-terminus IPR010713
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

1 Localization

Analysis Start End Length
SignalP_EUK 1 23 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting