Protein : Qrob_P0317660.2 Q. robur
Protein Identifier  ? Qrob_P0317660.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K16569 - gamma-tubulin complex component 2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 171  
Kegg Orthology  K16569
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0000226 microtubule cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
GO:0000922 spindle pole Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.
GO:0005815 microtubule organizing center An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0010s18810g 1 144 + 144 Gaps:2 20.25 711 77.08 8e-71 POPTRDRAFT_833741 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa001919mg 1 144 + 144 none 19.43 741 75.69 2e-70 hypothetical protein
blastp_kegg lcl|pmum:103339203 6 144 + 139 none 19.74 704 77.70 2e-70 gamma-tubulin complex component 2
blastp_kegg lcl|vvi:100259303 9 144 + 136 Gaps:2 19.68 681 81.34 2e-69 gamma-tubulin complex component 2-like
blastp_kegg lcl|tcc:TCM_025120 10 144 + 135 Gaps:1 19.35 703 79.41 1e-68 Gamma-tubulin complex component putative isoform 1
blastp_kegg lcl|rcu:RCOM_1158460 5 144 + 140 Gaps:2 19.35 713 75.36 4e-68 gamma-tubulin complex component putative
blastp_kegg lcl|ath:AT5G17410 6 144 + 139 none 20.50 678 71.94 2e-66 Spc97 / Spc98 family of spindle pole body (SBP) component
blastp_kegg lcl|aly:ARALYDRAFT_488606 6 144 + 139 none 20.50 678 71.22 2e-66 hypothetical protein
blastp_kegg lcl|cmo:103491002 7 144 + 138 Gaps:4 19.24 707 77.94 5e-66 gamma-tubulin complex component 2
blastp_kegg lcl|brp:103856248 1 144 + 144 Gaps:4 20.91 679 73.94 7e-66 gamma-tubulin complex component 2
blastp_uniprot_sprot sp|Q921G8|GCP2_MOUSE 12 154 + 143 Gaps:16 14.03 905 42.52 4e-23 Gamma-tubulin complex component 2 OS Mus musculus GN Tubgcp2 PE 2 SV 2
blastp_uniprot_sprot sp|Q5R5J6|GCP2_PONAB 12 154 + 143 Gaps:16 14.08 902 41.73 7e-22 Gamma-tubulin complex component 2 OS Pongo abelii GN TUBGCP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9BSJ2|GCP2_HUMAN 12 154 + 143 Gaps:16 14.08 902 41.73 1e-21 Gamma-tubulin complex component 2 OS Homo sapiens GN TUBGCP2 PE 1 SV 2
blastp_uniprot_sprot sp|Q95ZG3|SPC97_DICDI 5 154 + 150 Gaps:11 11.31 1335 29.80 2e-14 Spindle pole body component 97 OS Dictyostelium discoideum GN spc97 PE 2 SV 2
blastp_uniprot_sprot sp|Q9Y705|ALP4_SCHPO 66 163 + 98 Gaps:8 13.52 784 32.08 2e-11 Spindle pole body component alp4 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN alp4 PE 1 SV 1
rpsblast_cdd gnl|CDD|202901 73 154 + 82 Gaps:3 15.72 528 28.92 3e-09 pfam04130 Spc97_Spc98 Spc97 / Spc98 family. The spindle pole body (SPB) functions as the microtubule-organising centre in yeast. Members of this family are spindle pole body (SBP) components such as Spc97 and Spc98 that form a complex with gamma-tubulin. This family of proteins includes the grip motif 1 and grip moti 2.
rpsblast_kog gnl|CDD|37212 7 155 + 149 Gaps:9 21.53 734 34.81 2e-30 KOG2001 KOG2001 KOG2001 Gamma-tubulin complex DGRIP84/SPC97 component [Cytoskeleton].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 49 154 106 PTHR19302:SF13 none none none
Pfam 73 154 82 PF04130 "Reactome:REACT_152" Spc97 / Spc98 family IPR007259
PANTHER 11 33 23 PTHR19302:SF13 none none none
PANTHER 11 33 23 PTHR19302 "Reactome:REACT_152";signature_desc=GAMMA TUBULIN COMPLEX PROTEIN none IPR007259
PANTHER 49 154 106 PTHR19302 "Reactome:REACT_152";signature_desc=GAMMA TUBULIN COMPLEX PROTEIN none IPR007259

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting