Protein : Qrob_P0317430.2 Q. robur
Protein Identifier  ? Qrob_P0317430.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) KOG1418//KOG1419//KOG4404 - Tandem pore domain K+ channel [Inorganic ion transport and metabolism]. // Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]. // Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 369  
Kegg Orthology  K05389
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005774 vacuolar membrane The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
GO:0071805 potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.
GO:0005249 voltage-gated potassium channel activity Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO:0030007 cellular potassium ion homeostasis Any process involved in the maintenance of an internal steady state of potassium ions at the level of a cell.
GO:0005267 potassium channel activity Enables the selective, facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10033593mg 1 366 + 366 Gaps:31 100.00 391 56.01 2e-146 hypothetical protein
blastp_kegg lcl|cit:102629027 1 366 + 366 Gaps:29 100.00 391 54.73 2e-145 two pore potassium channel c-like
blastp_kegg lcl|tcc:TCM_001882 32 366 + 335 Gaps:2 85.90 390 58.21 5e-139 Calcium-activated outward-rectifying potassium channel putative isoform 1
blastp_kegg lcl|pop:POPTR_0002s06010g 1 366 + 366 Gaps:30 100.00 390 53.33 8e-139 POPTRDRAFT_410868 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0235520 1 367 + 367 Gaps:24 99.74 384 55.35 3e-138 Calcium-activated outward-rectifying potassium channel putative
blastp_kegg lcl|gmx:100789639 30 364 + 335 Gaps:1 87.66 381 58.98 3e-138 two-pore potassium channel 3-like
blastp_kegg lcl|mdm:103443184 38 366 + 329 Gaps:3 83.00 400 62.65 5e-135 two-pore potassium channel 3-like
blastp_kegg lcl|mdm:103405172 1 364 + 364 Gaps:36 99.24 397 55.33 2e-134 two-pore potassium channel 3-like
blastp_kegg lcl|pxb:103947436 38 366 + 329 Gaps:3 83.00 400 62.35 1e-133 two-pore potassium channel 3-like
blastp_kegg lcl|pxb:103965979 56 364 + 309 Gaps:2 78.34 397 63.34 6e-132 two-pore potassium channel 3-like
blastp_pdb 3ouf_B 92 160 + 69 Gaps:1 72.16 97 40.00 4e-09 mol:protein length:97 Potassium channel protein
blastp_pdb 3ouf_A 92 160 + 69 Gaps:1 72.16 97 40.00 4e-09 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4z_B 92 160 + 69 Gaps:1 72.16 97 38.57 1e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4z_A 92 160 + 69 Gaps:1 72.16 97 38.57 1e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_B 92 160 + 69 Gaps:1 72.16 97 38.57 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_A 92 160 + 69 Gaps:1 72.16 97 38.57 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4d_B 92 160 + 69 Gaps:1 72.16 97 38.57 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4d_A 92 160 + 69 Gaps:1 72.16 97 38.57 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tcu_B 92 160 + 69 Gaps:1 72.16 97 38.57 2e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tcu_A 92 160 + 69 Gaps:1 72.16 97 38.57 2e-08 mol:protein length:97 Potassium channel protein
blastp_uniprot_sprot sp|Q9SVV6|KCO6_ARATH 75 364 + 290 Gaps:1 66.74 436 47.77 3e-88 Two-pore potassium channel 3 OS Arabidopsis thaliana GN TPK3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL25|KCO2_ARATH 72 363 + 292 Gaps:11 67.95 443 46.18 6e-84 Two-pore potassium channel 2 OS Arabidopsis thaliana GN TPK2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S6Z8|KCO5_ARATH 10 364 + 355 Gaps:19 89.22 408 39.56 1e-79 Two-pore potassium channel 5 OS Arabidopsis thaliana GN TPK5 PE 1 SV 1
blastp_uniprot_sprot sp|Q69TN4|KCO3_ORYSJ 83 363 + 281 Gaps:4 62.50 456 42.81 6e-78 Two pore potassium channel c OS Oryza sativa subsp. japonica GN TPKC PE 3 SV 1
blastp_uniprot_sprot sp|Q8LIN5|KCO2_ORYSJ 99 362 + 264 Gaps:9 73.07 349 38.04 2e-55 Two pore potassium channel b OS Oryza sativa subsp. japonica GN TPKB PE 1 SV 1
blastp_uniprot_sprot sp|Q8LBL1|KCO1_ARATH 67 363 + 297 Gaps:17 83.20 363 35.43 5e-55 Two-pore potassium channel 1 OS Arabidopsis thaliana GN TPK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FWX6|KCO4_ARATH 72 347 + 276 Gaps:34 91.55 284 37.31 1e-47 Two-pore potassium channel 4 OS Arabidopsis thaliana GN TPK4 PE 2 SV 2
blastp_uniprot_sprot sp|Q850M0|KCO1_ORYSJ 21 362 + 342 Gaps:18 96.83 347 34.23 2e-46 Two pore potassium channel a OS Oryza sativa subsp. japonica GN TPKA PE 1 SV 1
blastp_uniprot_sprot sp|Q9XFR0|KCO3_ARATH 207 362 + 156 Gaps:3 58.85 260 49.67 1e-38 Potassium inward rectifier (Kir)-like channel 3 OS Arabidopsis thaliana GN KCO3 PE 1 SV 1
blastp_uniprot_sprot sp|P40310|TOK1_YEAST 95 268 + 174 Gaps:27 27.64 691 28.27 2e-11 Outward-rectifier potassium channel TOK1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TOK1 PE 1 SV 1

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 229 262 34 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 125 153 29 PR01333 none Two pore domain K+ channel signature IPR003280
PRINTS 245 254 10 PR01333 none Two pore domain K+ channel signature IPR003280
PANTHER 89 362 274 PTHR11003:SF88 none none IPR031144
SUPERFAMILY 194 302 109 SSF81324 none none none
Phobius 141 161 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 82 82 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 89 362 274 PTHR11003 none none none
Phobius 263 282 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 311 323 13 PS00018 none EF-hand calcium-binding domain. IPR018247
Phobius 106 116 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 309 365 57 G3DSA:1.10.238.10 none none IPR011992
Phobius 162 206 45 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 307 364 58 SSF47473 none none none
Gene3D 206 291 86 G3DSA:1.10.287.70 none none none
Phobius 117 135 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 213 281 69 PF07885 none Ion channel IPR013099
Pfam 95 166 72 PF07885 none Ion channel IPR013099
Gene3D 84 168 85 G3DSA:1.10.287.70 none none none
Phobius 283 368 86 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 207 228 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 136 140 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 83 105 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 80 168 89 SSF81324 none none none

5 Localization

Analysis Start End Length
TMHMM 140 162 22
TMHMM 207 229 22
TMHMM 84 106 22
TMHMM 119 136 17
TMHMM 262 284 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting