Protein : Qrob_P0315390.2 Q. robur
Protein Identifier  ? Qrob_P0315390.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) K11824 - AP-2 complex subunit alpha Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1012  
Kegg Orthology  K11824
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0030131 clathrin adaptor complex A membrane coat adaptor complex that links clathrin to a membrane.
GO:0030117 membrane coat Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103954740 1 1011 + 1011 Gaps:42 100.00 1019 87.14 0.0 AP-2 complex subunit alpha-1-like
blastp_kegg lcl|pper:PRUPE_ppa000732mg 1 1011 + 1011 Gaps:45 100.00 1020 88.63 0.0 hypothetical protein
blastp_kegg lcl|mdm:103423934 1 1011 + 1011 Gaps:42 100.00 1019 87.24 0.0 AP-2 complex subunit alpha-1-like
blastp_kegg lcl|rcu:RCOM_1186100 1 1011 + 1011 Gaps:43 100.00 1018 87.62 0.0 AP-2 complex subunit alpha putative
blastp_kegg lcl|pmum:103326586 1 1011 + 1011 Gaps:73 100.00 1048 86.16 0.0 AP-2 complex subunit alpha-1-like
blastp_kegg lcl|tcc:TCM_041529 1 1011 + 1011 Gaps:44 99.90 1024 85.92 0.0 Adaptor protein complex AP-2 alpha subunit isoform 1
blastp_kegg lcl|gmx:100793930 1 1011 + 1011 Gaps:53 100.00 1020 87.94 0.0 AP-2 complex subunit alpha-1-like
blastp_kegg lcl|gmx:100798273 1 1011 + 1011 Gaps:53 100.00 1020 87.75 0.0 AP-2 complex subunit alpha-1-like
blastp_kegg lcl|mdm:103448008 1 1011 + 1011 Gaps:43 100.00 1020 86.76 0.0 AP-2 complex subunit alpha-1-like
blastp_kegg lcl|fve:101302334 1 1011 + 1011 Gaps:44 100.00 1021 86.39 0.0 AP-2 complex subunit alpha-2-like
blastp_pdb 2xa7_A 5 598 + 594 Gaps:49 97.75 621 43.99 2e-167 mol:protein length:621 ADAPTOR-RELATED PROTEIN COMPLEX 2 ALPHA 2 SU
blastp_pdb 2vgl_A 5 598 + 594 Gaps:49 97.75 621 43.99 2e-167 mol:protein length:621 ADAPTOR PROTEIN COMPLEX AP-2 ALPHA 2 SUBUNIT
blastp_pdb 2jkt_L 5 596 + 592 Gaps:49 97.11 623 43.97 1e-166 mol:protein length:623 AP-2 COMPLEX SUBUNIT ALPHA-2
blastp_pdb 2jkt_A 5 596 + 592 Gaps:49 97.11 623 43.97 1e-166 mol:protein length:623 AP-2 COMPLEX SUBUNIT ALPHA-2
blastp_pdb 2jkr_L 5 596 + 592 Gaps:49 97.11 623 43.97 1e-166 mol:protein length:623 AP-2 COMPLEX SUBUNIT ALPHA-2
blastp_pdb 2jkr_A 5 596 + 592 Gaps:49 97.11 623 43.97 1e-166 mol:protein length:623 AP-2 COMPLEX SUBUNIT ALPHA-2
blastp_pdb 1w63_K 9 586 + 578 Gaps:55 93.69 618 30.40 5e-70 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 1w63_I 9 586 + 578 Gaps:55 93.69 618 30.40 5e-70 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 1w63_G 9 586 + 578 Gaps:55 93.69 618 30.40 5e-70 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_pdb 1w63_E 9 586 + 578 Gaps:55 93.69 618 30.40 5e-70 mol:protein length:618 ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUB
blastp_uniprot_sprot sp|Q8LPK4|AP2A2_ARATH 3 1011 + 1009 Gaps:54 100.00 1013 80.55 0.0 AP-2 complex subunit alpha-2 OS Arabidopsis thaliana GN ALPHAC-AD PE 1 SV 1
blastp_uniprot_sprot sp|Q8LPL6|AP2A1_ARATH 3 1011 + 1009 Gaps:49 100.00 1012 80.34 0.0 AP-2 complex subunit alpha-1 OS Arabidopsis thaliana GN ALPHA-ADR PE 1 SV 1
blastp_uniprot_sprot sp|P91926|AP2A_DROME 5 972 + 968 Gaps:119 99.26 940 39.98 0.0 AP-2 complex subunit alpha OS Drosophila melanogaster GN AP-2alpha PE 1 SV 1
blastp_uniprot_sprot sp|Q29N38|AP2A_DROPS 5 972 + 968 Gaps:116 99.25 939 39.38 0.0 AP-2 complex subunit alpha OS Drosophila pseudoobscura pseudoobscura GN alpha-Adaptin PE 3 SV 1
blastp_uniprot_sprot sp|P17426|AP2A1_MOUSE 5 972 + 968 Gaps:129 99.18 977 38.39 0.0 AP-2 complex subunit alpha-1 OS Mus musculus GN Ap2a1 PE 1 SV 1
blastp_uniprot_sprot sp|P18484|AP2A2_RAT 5 972 + 968 Gaps:112 99.15 938 39.14 0.0 AP-2 complex subunit alpha-2 OS Rattus norvegicus GN Ap2a2 PE 1 SV 3
blastp_uniprot_sprot sp|P17427|AP2A2_MOUSE 5 972 + 968 Gaps:112 99.15 938 39.03 0.0 AP-2 complex subunit alpha-2 OS Mus musculus GN Ap2a2 PE 1 SV 2
blastp_uniprot_sprot sp|O95782|AP2A1_HUMAN 5 972 + 968 Gaps:131 99.18 977 38.29 0.0 AP-2 complex subunit alpha-1 OS Homo sapiens GN AP2A1 PE 1 SV 3
blastp_uniprot_sprot sp|Q0VCK5|AP2A2_BOVIN 5 972 + 968 Gaps:120 99.15 938 39.68 0.0 AP-2 complex subunit alpha-2 OS Bos taurus GN AP2A2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7QG73|AP2A_ANOGA 5 972 + 968 Gaps:125 99.25 934 39.16 0.0 AP-2 complex subunit alpha OS Anopheles gambiae GN alpha-Adaptin PE 3 SV 4

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 859 972 114 G3DSA:3.30.310.30 none none IPR015873
PANTHER 717 974 258 PTHR22780:SF4 none none none
PANTHER 1 350 350 PTHR22780:SF4 none none none
PANTHER 367 696 330 PTHR22780:SF4 none none none
Pfam 857 965 109 PF02296 "Reactome:REACT_11061","Reactome:REACT_13685","Reactome:REACT_18266","Reactome:REACT_6185","Reactome:REACT_9417" Alpha adaptin AP2, C-terminal domain IPR003164
SUPERFAMILY 729 856 128 SSF49348 none none IPR013041
Pfam 28 574 547 PF01602 none Adaptin N terminal region IPR002553
Gene3D 730 857 128 G3DSA:2.60.40.1030 "Reactome:REACT_11061","Reactome:REACT_13685","Reactome:REACT_18266","Reactome:REACT_6185","Reactome:REACT_9417" none IPR013038
SMART 742 851 110 SM00809 none Adaptin C-terminal domain IPR008152
Pfam 749 846 98 PF02883 none Adaptin C-terminal domain IPR008152
Gene3D 5 600 596 G3DSA:1.25.10.10 none none IPR011989
PANTHER 717 974 258 PTHR22780 none none none
PANTHER 1 350 350 PTHR22780 none none none
PANTHER 367 696 330 PTHR22780 none none none
SUPERFAMILY 857 972 116 SSF55711 none none IPR009028
SUPERFAMILY 5 573 569 SSF48371 none none IPR016024

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting