Protein : Qrob_P0315070.2 Q. robur
Protein Identifier  ? Qrob_P0315070.2 Organism . Name  Quercus robur
Score  93.0 Score Type  egn
Protein Description  (M=2) 2.5.1.75 - tRNA dimethylallyltransferase. Code Enzyme  EC:2.5.1.75
Gene Prediction Quality  validated Protein length 

Sequence

Length: 515  
Kegg Orthology  K00791
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0008033 tRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10028244mg 8 508 + 501 Gaps:30 96.52 488 68.58 0.0 hypothetical protein
blastp_kegg lcl|pmum:103326799 34 509 + 476 Gaps:21 99.34 458 70.77 0.0 tRNA dimethylallyltransferase 2
blastp_kegg lcl|pxb:103954763 2 514 + 513 Gaps:31 99.18 486 68.46 0.0 tRNA dimethylallyltransferase 2
blastp_kegg lcl|mdm:103424065 2 508 + 507 Gaps:29 98.35 486 68.83 0.0 IPT tRNA dimethylallyltransferase 2
blastp_kegg lcl|cit:102615106 27 508 + 482 Gaps:22 82.44 558 69.13 0.0 tRNA dimethylallyltransferase 2-like
blastp_kegg lcl|pop:POPTR_0009s14980g 34 503 + 470 Gaps:26 98.68 454 69.64 0.0 POPTRDRAFT_767159 TRNA ISOPENTENYLTRANSFERASE family protein
blastp_kegg lcl|pvu:PHAVU_011G091500g 20 509 + 490 Gaps:24 97.69 477 65.67 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0793270 34 496 + 463 Gaps:26 96.91 453 73.12 0.0 tRNA delta(2)-isopentenylpyrophosphate transferase putative (EC:2.5.1.8)
blastp_kegg lcl|tcc:TCM_041492 33 506 + 474 Gaps:17 93.08 491 69.58 0.0 TRNA delta(2)-isopentenylpyrophosphate transferase isoform 1
blastp_kegg lcl|gmx:100792690 12 497 + 486 Gaps:34 96.23 478 67.17 0.0 tRNA dimethylallyltransferase 2-like
blastp_pdb 3epl_B 29 497 + 469 Gaps:95 98.29 409 31.59 7e-42 mol:protein length:409 tRNA isopentenyltransferase
blastp_pdb 3epl_A 29 497 + 469 Gaps:95 98.29 409 31.59 7e-42 mol:protein length:409 tRNA isopentenyltransferase
blastp_pdb 3epk_B 29 497 + 469 Gaps:95 98.29 409 31.59 7e-42 mol:protein length:409 tRNA isopentenyltransferase
blastp_pdb 3epk_A 29 497 + 469 Gaps:95 98.29 409 31.59 7e-42 mol:protein length:409 tRNA isopentenyltransferase
blastp_pdb 3epj_B 29 497 + 469 Gaps:95 98.29 409 31.59 7e-42 mol:protein length:409 tRNA isopentenyltransferase
blastp_pdb 3epj_A 29 497 + 469 Gaps:95 98.29 409 31.59 7e-42 mol:protein length:409 tRNA isopentenyltransferase
blastp_pdb 3eph_B 29 497 + 469 Gaps:95 98.29 409 31.59 7e-42 mol:protein length:409 tRNA isopentenyltransferase
blastp_pdb 3eph_A 29 497 + 469 Gaps:95 98.29 409 31.59 7e-42 mol:protein length:409 tRNA isopentenyltransferase
blastp_pdb 3exa_D 27 382 + 356 Gaps:97 84.78 322 40.29 4e-38 mol:protein length:322 tRNA delta(2)-isopentenylpyrophosphate transf
blastp_pdb 3exa_C 27 382 + 356 Gaps:97 84.78 322 40.29 4e-38 mol:protein length:322 tRNA delta(2)-isopentenylpyrophosphate transf
blastp_uniprot_sprot sp|Q9ZUX7|IPT2_ARATH 17 506 + 490 Gaps:41 98.93 466 61.39 0.0 tRNA dimethylallyltransferase 2 OS Arabidopsis thaliana GN IPT2 PE 1 SV 2
blastp_uniprot_sprot sp|Q80UN9|MOD5_MOUSE 30 493 + 464 Gaps:86 86.51 467 35.64 4e-57 tRNA dimethylallyltransferase mitochondrial OS Mus musculus GN Trit1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9H3H1|MOD5_HUMAN 30 493 + 464 Gaps:84 86.51 467 34.16 6e-56 tRNA dimethylallyltransferase mitochondrial OS Homo sapiens GN TRIT1 PE 1 SV 1
blastp_uniprot_sprot sp|B1HRH3|MIAA_LYSSC 23 332 + 310 Gaps:50 88.00 300 42.42 2e-44 tRNA dimethylallyltransferase OS Lysinibacillus sphaericus (strain C3-41) GN miaA PE 3 SV 1
blastp_uniprot_sprot sp|A4IMI5|MIAA_GEOTN 29 321 + 293 Gaps:53 79.37 315 43.60 4e-42 tRNA dimethylallyltransferase OS Geobacillus thermodenitrificans (strain NG80-2) GN miaA PE 3 SV 1
blastp_uniprot_sprot sp|B7GIA2|MIAA_ANOFW 29 382 + 354 Gaps:100 85.53 311 43.23 4e-42 tRNA dimethylallyltransferase OS Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN miaA PE 3 SV 1
blastp_uniprot_sprot sp|P07884|MOD5_YEAST 10 497 + 488 Gaps:112 96.73 428 32.13 5e-42 tRNA dimethylallyltransferase mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN MOD5 PE 1 SV 2
blastp_uniprot_sprot sp|Q39TZ3|MIAA_GEOMG 23 316 + 294 Gaps:41 83.17 309 40.08 3e-40 tRNA dimethylallyltransferase OS Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN miaA PE 3 SV 1
blastp_uniprot_sprot sp|B8E281|MIAA_DICTD 27 349 + 323 Gaps:55 82.82 326 35.93 3e-39 tRNA dimethylallyltransferase OS Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN miaA PE 3 SV 1
blastp_uniprot_sprot sp|B9M3M9|MIAA2_GEODF 25 312 + 288 Gaps:45 76.99 326 40.24 3e-39 tRNA dimethylallyltransferase 2 OS Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN miaA2 PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 62 316 255 PF01715 "KEGG:00908+2.5.1.75","MetaCyc:PWY-2781" IPP transferase IPR018022
PANTHER 24 219 196 PTHR11088:SF26 none none none
PANTHER 240 321 82 PTHR11088:SF26 none none none
PANTHER 352 504 153 PTHR11088:SF26 none none none
Gene3D 359 383 25 G3DSA:1.10.287.890 none none none
Gene3D 264 312 49 G3DSA:1.10.287.890 none none none
Gene3D 174 207 34 G3DSA:3.40.50.300 none none IPR027417
Gene3D 26 142 117 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 31 137 107 SSF52540 none none IPR027417
Hamap 30 407 378 MF_00185 "KEGG:00908+2.5.1.75","MetaCyc:PWY-2781" tRNA dimethylallyltransferase [miaA]. IPR018022
TIGRFAM 30 225 196 TIGR00174 "KEGG:00908+2.5.1.75","MetaCyc:PWY-2781" miaA: tRNA dimethylallyltransferase IPR018022
PANTHER 24 219 196 PTHR11088 none none none
PANTHER 240 321 82 PTHR11088 none none none
PANTHER 352 504 153 PTHR11088 none none none
SUPERFAMILY 29 62 34 SSF52540 none none IPR027417
SUPERFAMILY 188 295 108 SSF52540 none none IPR027417

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting