Protein : Qrob_P0314390.2 Q. robur
Protein Identifier  ? Qrob_P0314390.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR32370:SF4 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 (PTHR32370:SF4) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 640  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0009958 positive gravitropism The orientation of plant parts towards gravity.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103335210 1 639 + 639 Gaps:15 100.00 626 84.98 0.0 BTB/POZ domain-containing protein NPY2-like
blastp_kegg lcl|tcc:TCM_007212 1 639 + 639 Gaps:15 97.50 640 84.78 0.0 Phototropic-responsive NPH3 family protein isoform 1
blastp_kegg lcl|pper:PRUPE_ppa002913mg 1 639 + 639 Gaps:19 100.00 622 84.08 0.0 hypothetical protein
blastp_kegg lcl|mdm:103429904 1 639 + 639 Gaps:15 100.00 626 82.27 0.0 BTB/POZ domain-containing protein NPY2
blastp_kegg lcl|mdm:103409333 1 639 + 639 Gaps:15 100.00 626 82.75 0.0 BTB/POZ domain-containing protein NPY2-like
blastp_kegg lcl|pxb:103938801 1 639 + 639 Gaps:15 100.00 626 82.43 0.0 BTB/POZ domain-containing protein NPY2-like
blastp_kegg lcl|fve:101314519 1 639 + 639 Gaps:20 100.00 621 84.70 0.0 BTB/POZ domain-containing protein NPY2-like
blastp_kegg lcl|vvi:100263403 1 639 + 639 Gaps:15 100.00 626 83.71 0.0 BTB/POZ domain-containing protein NPY2-like
blastp_kegg lcl|pxb:103928096 1 639 + 639 Gaps:22 100.00 617 82.50 0.0 BTB/POZ domain-containing protein NPY2-like
blastp_kegg lcl|cit:102609420 1 639 + 639 Gaps:20 100.00 619 80.29 0.0 BTB/POZ domain-containing protein NPY2-like
blastp_uniprot_sprot sp|O80970|NPY2_ARATH 1 598 + 598 Gaps:33 91.64 634 67.47 0.0 BTB/POZ domain-containing protein NPY2 OS Arabidopsis thaliana GN NPY2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WL52|NPY5_ARATH 1 608 + 608 Gaps:99 95.34 580 59.67 0.0 BTB/POZ domain-containing protein NPY5 OS Arabidopsis thaliana GN NPY5 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FN09|NPY3_ARATH 1 632 + 632 Gaps:90 98.79 579 59.62 0.0 BTB/POZ domain-containing protein NPY3 OS Arabidopsis thaliana GN NPY3 PE 2 SV 1
blastp_uniprot_sprot sp|O64814|NPY4_ARATH 1 505 + 505 Gaps:70 94.59 481 64.18 0.0 BTB/POZ domain-containing protein NPY4 OS Arabidopsis thaliana GN NPY4 PE 2 SV 1
blastp_uniprot_sprot sp|Q8H1D3|NPY1_ARATH 1 604 + 604 Gaps:77 94.05 571 51.96 1e-171 BTB/POZ domain-containing protein NPY1 OS Arabidopsis thaliana GN NPY1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C9V6|Y1790_ARATH 1 601 + 601 Gaps:70 98.42 631 45.25 1e-154 BTB/POZ domain-containing protein At1g67900 OS Arabidopsis thaliana GN At1g67900 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LIM6|Y3649_ARATH 1 505 + 505 Gaps:59 87.07 588 42.58 7e-124 BTB/POZ domain-containing protein At3g26490 OS Arabidopsis thaliana GN At3g26490 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FIK1|Y5780_ARATH 1 509 + 509 Gaps:48 86.40 559 40.99 1e-119 BTB/POZ domain-containing protein At5g47800 OS Arabidopsis thaliana GN At5g47800 PE 2 SV 1
blastp_uniprot_sprot sp|Q5KS50|NPH3_ORYSJ 34 604 + 571 Gaps:122 89.37 762 34.65 3e-119 Coleoptile phototropism protein 1 OS Oryza sativa subsp. japonica GN CPT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYW0|Y5325_ARATH 1 504 + 504 Gaps:56 85.47 592 40.12 1e-117 BTB/POZ domain-containing protein At5g03250 OS Arabidopsis thaliana GN At5g03250 PE 2 SV 1
rpsblast_cdd gnl|CDD|202505 221 476 + 256 Gaps:11 100.00 249 52.21 1e-97 pfam03000 NPH3 NPH3 family. Phototropism of Arabidopsis thaliana seedlings in response to a blue light source is initiated by nonphototropic hypocotyl 1 (NPH1) a light-activated serine-threonine protein kinase. Mutations in NPH3 disrupt early signaling occurring downstream of the NPH1 photoreceptor. The NPH3 gene encodes a NPH1-interacting protein. NPH3 is a member of a large protein family apparently specific to higher plants and may function as an adapter or scaffold protein to bring together the enzymatic components of a NPH1-activated phosphorelay.
rpsblast_cdd gnl|CDD|197585 42 130 + 89 Gaps:5 90.72 97 27.27 8e-08 smart00225 BTB Broad-Complex Tramtrack and Bric a brac. Domain in Broad-Complex Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 639 639 PTHR32370:SF4 "UniPathway:UPA00143";signature_desc=BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 (PTHR32370:SF4) none IPR029960
SMART 41 139 99 SM00225 none Broad-Complex, Tramtrack and Bric a brac IPR000210
Gene3D 33 128 96 G3DSA:3.30.710.10 none none none
Coils 367 388 22 Coil none none none
Pfam 39 130 92 PF00651 none BTB/POZ domain IPR013069
SUPERFAMILY 31 129 99 SSF54695 none none IPR011333
ProSiteProfiles 41 109 69 PS50097 none BTB domain profile. IPR000210
PANTHER 1 639 639 PTHR32370 none none none
ProSiteProfiles 222 500 279 PS51649 "UniPathway:UPA00143" NPH3 domain profile. IPR027356
Pfam 221 476 256 PF03000 "UniPathway:UPA00143" NPH3 family IPR027356

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting