Protein : Qrob_P0313100.2 Q. robur
Protein Identifier  ? Qrob_P0313100.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K04082 - molecular chaperone HscB Gene Prediction Quality  validated
Protein length 

Sequence

Length: 320  
Kegg Orthology  K04082
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0051087 chaperone binding Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.
GO:0051259 protein oligomerization The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_023091 1 319 + 319 Gaps:73 100.00 272 62.13 3e-90 DNAJ heat shock N-terminal domain-containing protein putative isoform 1
blastp_kegg lcl|cmo:103486700 15 319 + 305 Gaps:74 95.64 275 61.60 3e-88 iron-sulfur cluster co-chaperone protein HscB mitochondrial
blastp_kegg lcl|csv:101211147 47 319 + 273 Gaps:59 78.55 275 69.44 5e-85 iron-sulfur cluster co-chaperone protein HscB mitochondrial-like
blastp_kegg lcl|cic:CICLE_v10012448mg 48 319 + 272 Gaps:59 78.02 273 67.14 4e-84 hypothetical protein
blastp_kegg lcl|vvi:100254709 1 319 + 319 Gaps:14 100.00 267 62.55 7e-81 iron-sulfur cluster co-chaperone protein HscB mitochondrial-like
blastp_kegg lcl|cit:102609494 54 319 + 266 Gaps:1 75.82 273 72.46 9e-79 iron-sulfur cluster co-chaperone protein HscB mitochondrial-like
blastp_kegg lcl|pper:PRUPE_ppa016242mg 9 319 + 311 Gaps:17 97.76 268 69.47 3e-78 hypothetical protein
blastp_kegg lcl|pxb:103940292 46 318 + 273 Gaps:4 79.63 270 71.16 3e-77 iron-sulfur cluster co-chaperone protein HscB mitochondrial-like
blastp_kegg lcl|mdm:103414935 46 318 + 273 Gaps:2 79.63 270 70.23 3e-76 iron-sulfur cluster co-chaperone protein HscB mitochondrial-like
blastp_kegg lcl|pmum:103339561 9 319 + 311 Gaps:17 97.76 268 68.70 3e-76 iron-sulfur cluster co-chaperone protein HscB mitochondrial
blastp_pdb 3bvo_B 61 215 + 155 Gaps:3 76.33 207 31.65 5e-24 mol:protein length:207 Co-chaperone protein HscB mitochondrial prec
blastp_pdb 3bvo_A 61 215 + 155 Gaps:3 76.33 207 31.65 5e-24 mol:protein length:207 Co-chaperone protein HscB mitochondrial prec
blastp_pdb 3hho_D 100 202 + 103 Gaps:1 59.77 174 37.50 2e-19 mol:protein length:174 Co-chaperone protein hscB homolog
blastp_pdb 3hho_C 100 202 + 103 Gaps:1 59.77 174 37.50 2e-19 mol:protein length:174 Co-chaperone protein hscB homolog
blastp_pdb 3hho_B 100 202 + 103 Gaps:1 59.77 174 37.50 2e-19 mol:protein length:174 Co-chaperone protein hscB homolog
blastp_pdb 3hho_A 100 202 + 103 Gaps:1 59.77 174 37.50 2e-19 mol:protein length:174 Co-chaperone protein hscB homolog
blastp_pdb 1fpo_C 101 279 + 179 Gaps:23 98.25 171 33.93 9e-18 mol:protein length:171 CHAPERONE PROTEIN HSCB
blastp_pdb 1fpo_B 101 279 + 179 Gaps:23 98.25 171 33.93 9e-18 mol:protein length:171 CHAPERONE PROTEIN HSCB
blastp_pdb 1fpo_A 101 279 + 179 Gaps:23 98.25 171 33.93 9e-18 mol:protein length:171 CHAPERONE PROTEIN HSCB
blastp_pdb 3uo3_B 113 260 + 148 Gaps:22 81.77 181 28.38 3e-08 mol:protein length:181 J-type co-chaperone JAC1 mitochondrial
blastp_uniprot_sprot sp|Q8K3A0|HSC20_MOUSE 72 215 + 144 Gaps:3 62.82 234 34.01 8e-26 Iron-sulfur cluster co-chaperone protein HscB mitochondrial OS Mus musculus GN Hscb PE 2 SV 2
blastp_uniprot_sprot sp|Q8IWL3|HSC20_HUMAN 60 215 + 156 Gaps:3 67.66 235 31.45 4e-24 Iron-sulfur cluster co-chaperone protein HscB mitochondrial OS Homo sapiens GN HSCB PE 1 SV 3
blastp_uniprot_sprot sp|A8GHY0|HSCB_SERP5 101 222 + 122 Gaps:12 77.46 173 38.06 1e-19 Co-chaperone protein HscB OS Serratia proteamaculans (strain 568) GN hscB PE 3 SV 1
blastp_uniprot_sprot sp|Q9KTX9|HSCB_VIBCH 101 202 + 102 Gaps:1 60.23 171 37.86 1e-18 Co-chaperone protein HscB homolog OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN hscB PE 1 SV 1
blastp_uniprot_sprot sp|A5F3G7|HSCB_VIBC3 101 202 + 102 Gaps:1 60.23 171 37.86 1e-18 Co-chaperone protein HscB homolog OS Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN hscB PE 3 SV 1
blastp_uniprot_sprot sp|Q667Y4|HSCB_YERPS 101 233 + 133 Gaps:11 72.41 174 37.30 6e-18 Co-chaperone protein HscB OS Yersinia pseudotuberculosis serotype I (strain IP32953) GN hscB PE 3 SV 1
blastp_uniprot_sprot sp|B2K9R4|HSCB_YERPB 101 233 + 133 Gaps:11 72.41 174 37.30 6e-18 Co-chaperone protein HscB OS Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN hscB PE 3 SV 1
blastp_uniprot_sprot sp|A7FFX4|HSCB_YERP3 101 233 + 133 Gaps:11 72.41 174 37.30 6e-18 Co-chaperone protein HscB OS Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN hscB PE 3 SV 1
blastp_uniprot_sprot sp|B1JRZ1|HSCB_YERPY 101 210 + 110 Gaps:4 65.52 174 38.60 7e-18 Co-chaperone protein HscB OS Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN hscB PE 3 SV 1
blastp_uniprot_sprot sp|A4TMV1|HSCB_YERPP 101 210 + 110 Gaps:4 65.52 174 38.60 7e-18 Co-chaperone protein HscB OS Yersinia pestis (strain Pestoides F) GN hscB PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 9 16 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 180 217 38 SSF47144 none none IPR009073
Gene3D 67 172 106 G3DSA:1.10.287.110 none none IPR001623
Phobius 1 8 8 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 186 216 31 PF07743 none HSCB C-terminal oligomerisation domain IPR009073
Pfam 274 316 43 PF07743 none HSCB C-terminal oligomerisation domain IPR009073
SMART 101 166 66 SM00271 none DnaJ molecular chaperone homology domain IPR001623
TIGRFAM 114 251 138 TIGR00714 none hscB: Fe-S protein assembly co-chaperone HscB IPR004640
ProSiteProfiles 102 174 73 PS50076 none dnaJ domain profile. IPR001623
Phobius 25 319 295 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 102 170 69 PF00226 none DnaJ domain IPR001623
SUPERFAMILY 101 173 73 SSF46565 none none IPR001623
Gene3D 180 217 38 G3DSA:1.20.1280.20 none none IPR009073
PANTHER 63 216 154 PTHR14021 none none IPR004640
Phobius 17 24 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none

1 Localization

Analysis Start End Length
SignalP_EUK 1 17 16

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting