Protein : Qrob_P0312540.2 Q. robur
Protein Identifier  ? Qrob_P0312540.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=1) K16615 - actin-related protein 7, plant Gene Prediction Quality  validated
Protein length 

Sequence

Length: 406  
Kegg Orthology  K16615
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0032502 developmental process A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition.
GO:0006325 chromatin organization Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007632mg 1 355 + 355 none 98.34 361 89.30 0.0 hypothetical protein
blastp_kegg lcl|pxb:103945888 1 355 + 355 none 98.34 361 89.01 0.0 actin-related protein 7
blastp_kegg lcl|pmum:103330447 1 355 + 355 none 98.34 361 89.01 0.0 actin-related protein 7
blastp_kegg lcl|mdm:103405387 1 355 + 355 none 98.34 361 88.73 0.0 actin-related protein 7
blastp_kegg lcl|tcc:TCM_005870 1 355 + 355 none 98.34 361 87.04 0.0 Actin-related protein 7 isoform 1
blastp_kegg lcl|vvi:100255047 1 355 + 355 none 98.34 361 87.32 0.0 actin-related protein 7-like
blastp_kegg lcl|fve:101297872 1 355 + 355 none 98.34 361 86.76 0.0 actin-related protein 7-like
blastp_kegg lcl|csv:101230858 1 355 + 355 none 98.34 361 85.35 0.0 actin-related protein 7-like
blastp_kegg lcl|csv:101207809 1 355 + 355 none 98.34 361 85.35 0.0 actin-related protein 7-like
blastp_kegg lcl|cit:102615051 1 355 + 355 Gaps:2 98.35 363 84.31 0.0 actin-related protein 7-like
blastp_pdb 3b63_M 3 355 + 353 Gaps:26 99.45 365 39.67 4e-63 mol:protein length:365 Actin
blastp_pdb 3b63_L 3 355 + 353 Gaps:26 99.45 365 39.67 4e-63 mol:protein length:365 Actin
blastp_pdb 3ub5_A 3 355 + 353 Gaps:26 97.06 374 39.67 6e-63 mol:protein length:374 Actin cytoplasmic 1
blastp_pdb 3lue_J 3 355 + 353 Gaps:26 97.06 374 39.67 6e-63 mol:protein length:374 Actin cytoplasmic 1
blastp_pdb 3lue_I 3 355 + 353 Gaps:26 97.06 374 39.67 6e-63 mol:protein length:374 Actin cytoplasmic 1
blastp_pdb 3lue_H 3 355 + 353 Gaps:26 97.06 374 39.67 6e-63 mol:protein length:374 Actin cytoplasmic 1
blastp_pdb 3lue_G 3 355 + 353 Gaps:26 97.06 374 39.67 6e-63 mol:protein length:374 Actin cytoplasmic 1
blastp_pdb 3lue_F 3 355 + 353 Gaps:26 97.06 374 39.67 6e-63 mol:protein length:374 Actin cytoplasmic 1
blastp_pdb 3lue_E 3 355 + 353 Gaps:26 97.06 374 39.67 6e-63 mol:protein length:374 Actin cytoplasmic 1
blastp_pdb 3lue_D 3 355 + 353 Gaps:26 97.06 374 39.67 6e-63 mol:protein length:374 Actin cytoplasmic 1
blastp_uniprot_sprot sp|Q8L4Y5|ARP7_ARATH 1 355 + 355 Gaps:4 98.35 363 79.55 0.0 Actin-related protein 7 OS Arabidopsis thaliana GN ARP7 PE 1 SV 1
blastp_uniprot_sprot sp|A3ANB5|ARP7_ORYSJ 1 355 + 355 Gaps:1 98.33 360 72.60 0.0 Actin-related protein 7 OS Oryza sativa subsp. japonica GN ARP7 PE 2 SV 2
blastp_uniprot_sprot sp|A2XMK6|ARP7_ORYSI 1 355 + 355 Gaps:1 98.33 360 72.60 0.0 Actin-related protein 7 OS Oryza sativa subsp. indica GN ARP7 PE 2 SV 2
blastp_uniprot_sprot sp|Q9Y702|ACT1_SCHCO 3 355 + 353 Gaps:26 96.80 375 40.50 4e-65 Actin-1 OS Schizophyllum commune GN ACT1 PE 2 SV 1
blastp_uniprot_sprot sp|P48465|ACT_CRYNH 3 355 + 353 Gaps:26 96.80 375 40.77 5e-64 Actin OS Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN CNAG_00483 PE 3 SV 2
blastp_uniprot_sprot sp|Q9Y707|ACT2_SUIBO 3 355 + 353 Gaps:26 96.80 375 40.50 6e-64 Actin-2 OS Suillus bovinus GN ACT2 PE 2 SV 1
blastp_uniprot_sprot sp|P53689|ACT_PHARH 3 355 + 353 Gaps:26 96.80 375 40.77 7e-64 Actin OS Phaffia rhodozyma PE 3 SV 1
blastp_uniprot_sprot sp|P84336|ACTB_CAMDR 3 355 + 353 Gaps:26 96.80 375 39.94 2e-63 Actin cytoplasmic 1 OS Camelus dromedarius GN ACTB PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y701|ACT1_SUIBO 3 355 + 353 Gaps:26 96.80 375 40.22 3e-63 Actin-1 OS Suillus bovinus GN ACT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q25010|ACT3A_HELAM 3 355 + 353 Gaps:26 96.54 376 39.94 4e-63 Actin cytoplasmic A3a OS Helicoverpa armigera GN actA3a PE 2 SV 1

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 131 357 227 SSF53067 none none none
PANTHER 365 405 41 PTHR11937 none none IPR004000
Gene3D 3 171 169 G3DSA:3.30.420.40 none none none
SMART 1 405 405 SM00268 none Actin IPR004000
Gene3D 364 403 40 G3DSA:3.30.420.40 none none none
Gene3D 238 356 119 G3DSA:3.30.420.40 none none none
SUPERFAMILY 366 405 40 SSF53067 none none none
Pfam 2 357 356 PF00022 none Actin IPR004000
Pfam 365 405 41 PF00022 none Actin IPR004000
Gene3D 172 237 66 G3DSA:3.90.640.10 none none none
PRINTS 125 144 20 PR00190 none Actin signature IPR004000
PRINTS 217 233 17 PR00190 none Actin signature IPR004000
PRINTS 100 113 14 PR00190 none Actin signature IPR004000
PRINTS 23 32 10 PR00190 none Actin signature IPR004000
PANTHER 365 405 41 PTHR11937:SF158 none none IPR027678
PANTHER 1 314 314 PTHR11937 none none IPR004000
SUPERFAMILY 2 138 137 SSF53067 none none none
PANTHER 1 314 314 PTHR11937:SF158 none none IPR027678

0 Localization

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting