Protein : Qrob_P0305020.2 Q. robur
Protein Identifier  ? Qrob_P0305020.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) PF00004//PF05362 - ATPase family associated with various cellular activities (AAA) // Lon protease (S16) C-terminal proteolytic domain Code Enzyme  EC:3.4.21.53
Gene Prediction Quality  validated Protein length 

Sequence

Length: 480  
Kegg Orthology  K08675
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004252 serine-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO:0030163 protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
GO:0004176 ATP-dependent peptidase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103344549 5 475 + 471 Gaps:57 54.32 972 65.34 0.0 lon protease homolog 1 mitochondrial
blastp_kegg lcl|pop:POPTR_0005s01760g 5 479 + 475 Gaps:4 50.42 950 70.56 0.0 Lon protease 2 family protein
blastp_kegg lcl|mdm:103450854 5 475 + 471 Gaps:56 53.07 993 65.09 0.0 lon protease homolog 1 mitochondrial-like
blastp_kegg lcl|pvu:PHAVU_007G2012001 6 475 + 470 Gaps:43 99.03 518 65.69 0.0 hypothetical protein
blastp_kegg lcl|pxb:103962312 5 475 + 471 Gaps:56 53.07 993 64.90 0.0 lon protease homolog 1 mitochondrial
blastp_kegg lcl|mdm:103408525 4 479 + 476 Gaps:61 84.04 639 62.57 0.0 lon protease homolog mitochondrial-like
blastp_kegg lcl|pop:POPTR_0013s01030g 5 475 + 471 Gaps:22 50.93 968 67.55 0.0 POPTRDRAFT_894071 Lon protease 2 family protein
blastp_kegg lcl|csv:101227886 5 476 + 472 Gaps:44 71.77 719 64.92 0.0 lon protease homolog 1 mitochondrial-like
blastp_kegg lcl|pxb:103930561 5 479 + 475 Gaps:67 53.87 995 63.25 0.0 lon protease homolog 1 mitochondrial-like
blastp_kegg lcl|gmx:100810927 5 475 + 471 Gaps:37 51.68 983 67.32 0.0 lon protease homolog 1 mitochondrial-like
blastp_pdb 3m6a_F 5 471 + 467 Gaps:48 77.90 543 41.61 2e-97 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_E 5 471 + 467 Gaps:48 77.90 543 41.61 2e-97 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_D 5 471 + 467 Gaps:48 77.90 543 41.61 2e-97 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_C 5 471 + 467 Gaps:48 77.90 543 41.61 2e-97 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_B 5 471 + 467 Gaps:48 77.90 543 41.61 2e-97 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_A 5 471 + 467 Gaps:48 77.90 543 41.61 2e-97 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 2x36_F 284 475 + 192 Gaps:6 95.65 207 55.05 4e-71 mol:protein length:207 LON PROTEASE HOMOLOG MITOCHONDRIAL
blastp_pdb 2x36_E 284 475 + 192 Gaps:6 95.65 207 55.05 4e-71 mol:protein length:207 LON PROTEASE HOMOLOG MITOCHONDRIAL
blastp_pdb 2x36_D 284 475 + 192 Gaps:6 95.65 207 55.05 4e-71 mol:protein length:207 LON PROTEASE HOMOLOG MITOCHONDRIAL
blastp_pdb 2x36_C 284 475 + 192 Gaps:6 95.65 207 55.05 4e-71 mol:protein length:207 LON PROTEASE HOMOLOG MITOCHONDRIAL
blastp_uniprot_sprot sp|P93655|LONM1_ARATH 5 476 + 472 Gaps:10 51.28 940 66.39 0.0 Lon protease homolog 1 mitochondrial OS Arabidopsis thaliana GN LON1 PE 1 SV 2
blastp_uniprot_sprot sp|P93648|LONM_MAIZE 5 477 + 473 Gaps:41 53.32 964 63.23 0.0 Lon protease homolog mitochondrial OS Zea mays GN LON2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M9L8|LONM3_ARATH 5 475 + 471 Gaps:14 52.49 924 63.09 0.0 Lon protease homolog 3 mitochondrial OS Arabidopsis thaliana GN LON3 PE 3 SV 1
blastp_uniprot_sprot sp|Q9M9L7|LONM4_ARATH 5 475 + 471 Gaps:23 52.44 942 62.35 0.0 Lon protease homolog 4 chloroplastic/mitochondrial OS Arabidopsis thaliana GN LON4 PE 3 SV 1
blastp_uniprot_sprot sp|A4S6Y4|LONM_OSTLU 5 471 + 467 Gaps:36 46.05 936 58.00 7e-162 Lon protease homolog mitochondrial OS Ostreococcus lucimarinus (strain CCE9901) GN OSTLU_41620 PE 3 SV 1
blastp_uniprot_sprot sp|P36776|LONM_HUMAN 4 475 + 472 Gaps:47 45.57 959 54.92 2e-155 Lon protease homolog mitochondrial OS Homo sapiens GN LONP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q59HJ6|LONM_BOVIN 4 475 + 472 Gaps:48 45.58 961 53.20 3e-151 Lon protease homolog mitochondrial OS Bos taurus GN LONP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7KUT2|LONM_DROME 5 477 + 473 Gaps:49 42.97 1024 52.95 5e-151 Lon protease homolog mitochondrial OS Drosophila melanogaster GN CG8798 PE 2 SV 1
blastp_uniprot_sprot sp|Q8CGK3|LONM_MOUSE 4 471 + 468 Gaps:47 45.63 949 54.27 6e-151 Lon protease homolog mitochondrial OS Mus musculus GN Lonp1 PE 1 SV 2
blastp_uniprot_sprot sp|Q924S5|LONM_RAT 4 471 + 468 Gaps:47 45.58 950 54.27 1e-150 Lon protease homolog mitochondrial OS Rattus norvegicus GN Lonp1 PE 2 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 4 157 154 SM00382 none ATPases associated with a variety of cellular activities IPR003593
PRINTS 373 392 20 PR00830 none Endopeptidase La (Lon) serine protease (S16) signature none
PRINTS 12 31 20 PR00830 none Endopeptidase La (Lon) serine protease (S16) signature none
PRINTS 403 422 20 PR00830 none Endopeptidase La (Lon) serine protease (S16) signature none
PRINTS 292 308 17 PR00830 none Endopeptidase La (Lon) serine protease (S16) signature none
PRINTS 426 444 19 PR00830 none Endopeptidase La (Lon) serine protease (S16) signature none
Gene3D 288 472 185 G3DSA:3.30.230.10 none none IPR014721
SUPERFAMILY 292 472 181 SSF54211 none none IPR020568
PANTHER 5 226 222 PTHR10046:SF23 none none none
Gene3D 260 281 22 G3DSA:1.10.8.60 none none none
Gene3D 157 219 63 G3DSA:1.10.8.60 none none none
TIGRFAM 3 471 469 TIGR00763 none lon: endopeptidase La IPR004815
Pfam 8 144 137 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
PANTHER 257 476 220 PTHR10046:SF23 none none none
Pfam 267 471 205 PF05362 none Lon protease (S16) C-terminal proteolytic domain IPR008269
Gene3D 4 156 153 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 4 215 212 SSF52540 none none IPR027417
PANTHER 257 476 220 PTHR10046 none none IPR027065
PANTHER 5 226 222 PTHR10046 none none IPR027065

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting