Protein : Qrob_P0304960.2 Q. robur
Protein Identifier  ? Qrob_P0304960.2 Organism . Name  Quercus robur
Score  4.0 Score Type  egn
Protein Description  (M=9) 3.4.21.53 - Endopeptidase La. Code Enzyme  EC:3.4.21.53
Gene Prediction Quality  validated Protein length 

Sequence

Length: 279  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004252 serine-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO:0030163 protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
GO:0004176 ATP-dependent peptidase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103434074 7 256 + 250 Gaps:29 61.03 408 77.91 2e-120 lon protease homolog 1 mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa000809mg 5 256 + 252 Gaps:27 25.38 997 79.05 2e-120 hypothetical protein
blastp_kegg lcl|cmo:103499387 4 256 + 253 Gaps:30 54.45 461 74.10 1e-115 lon protease homolog 1 mitochondrial
blastp_kegg lcl|rcu:RCOM_1435030 16 256 + 241 Gaps:23 36.47 680 73.79 3e-115 ATP binding protein putative (EC:3.4.21.53)
blastp_kegg lcl|pxb:103930561 7 256 + 250 Gaps:29 25.03 995 77.11 5e-115 lon protease homolog 1 mitochondrial-like
blastp_kegg lcl|fve:101313904 8 256 + 249 Gaps:27 25.41 984 76.00 1e-114 lon protease homolog mitochondrial-like
blastp_kegg lcl|pmum:103330851 4 256 + 253 Gaps:34 24.98 1013 77.47 5e-113 lon protease homolog 1 mitochondrial-like
blastp_kegg lcl|mdm:103450854 7 256 + 250 Gaps:26 25.38 993 78.17 7e-113 lon protease homolog 1 mitochondrial-like
blastp_kegg lcl|pxb:103961891 7 256 + 250 Gaps:36 31.63 765 76.45 6e-110 lon protease homolog 1 mitochondrial-like
blastp_kegg lcl|csv:101204375 4 256 + 253 Gaps:30 25.82 972 73.71 1e-109 lon protease homolog mitochondrial-like
blastp_uniprot_sprot sp|P93655|LONM1_ARATH 1 256 + 256 Gaps:32 27.66 940 66.15 1e-90 Lon protease homolog 1 mitochondrial OS Arabidopsis thaliana GN LON1 PE 1 SV 2
blastp_uniprot_sprot sp|P93648|LONM_MAIZE 27 256 + 230 Gaps:15 25.41 964 61.63 9e-87 Lon protease homolog mitochondrial OS Zea mays GN LON2 PE 1 SV 1
blastp_uniprot_sprot sp|A2YQ56|LONM_ORYSI 29 256 + 228 Gaps:21 23.45 1002 67.23 2e-83 Lon protease homolog mitochondrial OS Oryza sativa subsp. indica GN OsI_27415 PE 2 SV 1
blastp_uniprot_sprot sp|Q69UZ3|LONM_ORYSJ 29 256 + 228 Gaps:21 23.45 1002 67.23 2e-83 Lon protease homolog mitochondrial OS Oryza sativa subsp. japonica GN Os07g0689300 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M9L7|LONM4_ARATH 8 256 + 249 Gaps:43 25.48 942 57.08 5e-66 Lon protease homolog 4 chloroplastic/mitochondrial OS Arabidopsis thaliana GN LON4 PE 3 SV 1
blastp_uniprot_sprot sp|Q9M9L8|LONM3_ARATH 18 250 + 233 Gaps:51 24.89 924 56.09 1e-59 Lon protease homolog 3 mitochondrial OS Arabidopsis thaliana GN LON3 PE 3 SV 1
blastp_uniprot_sprot sp|A4S6Y4|LONM_OSTLU 93 256 + 164 Gaps:62 22.01 936 29.61 2e-19 Lon protease homolog mitochondrial OS Ostreococcus lucimarinus (strain CCE9901) GN OSTLU_41620 PE 3 SV 1
blastp_uniprot_sprot sp|Q00WL5|LONM_OSTTA 95 256 + 162 Gaps:64 23.17 863 31.00 4e-18 Lon protease homolog mitochondrial OS Ostreococcus tauri GN Ot13g03180 PE 3 SV 1
blastp_uniprot_sprot sp|Q09769|LONM_SCHPO 102 218 + 117 Gaps:24 10.22 1067 44.95 8e-16 Lon protease homolog mitochondrial OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pim1 PE 3 SV 1
blastp_uniprot_sprot sp|Q5AZT7|LONM_EMENI 102 218 + 117 Gaps:23 9.78 1104 44.44 8e-16 Lon protease homolog mitochondrial OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN pim1 PE 3 SV 1
rpsblast_cdd gnl|CDD|162028 109 256 + 148 Gaps:26 19.61 775 30.92 1e-27 TIGR00763 lon ATP-dependent protease La. This protein is induced by heat shock and other stresses in E. coli B. subtilis and other species. The yeast member designated PIM1 is located in the mitochondrial matrix required for mitochondrial function and also induced by heat shock.
rpsblast_cdd gnl|CDD|197740 107 162 + 56 none 60.87 92 48.21 5e-13 smart00464 LON Found in ATP-dependent protease La (LON). N-terminal domain of the ATP-dependent protease La (LON) present also in other bacterial ORFs.
rpsblast_cdd gnl|CDD|202145 107 247 + 141 Gaps:46 72.77 191 28.78 4e-12 pfam02190 LON ATP-dependent protease La (LON) domain. This domain has been shown to be part of the PUA superfamily.
rpsblast_cdd gnl|CDD|30814 99 239 + 141 Gaps:28 15.73 782 27.64 3e-09 COG0466 Lon ATP-dependent Lon protease bacterial type [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37215 38 256 + 219 Gaps:36 26.82 906 30.45 3e-39 KOG2004 KOG2004 KOG2004 Mitochondrial ATP-dependent protease PIM1/LON [Posttranslational modification protein turnover chaperones].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 107 216 110 SSF88697 none none IPR015947
PANTHER 91 165 75 PTHR10046:SF23 none none none
SMART 107 270 164 SM00464 none Found in ATP-dependent protease La (LON) IPR003111
PANTHER 91 165 75 PTHR10046 none none IPR027065
PANTHER 181 264 84 PTHR10046 none none IPR027065
PANTHER 181 264 84 PTHR10046:SF23 none none none
Pfam 108 225 118 PF02190 none ATP-dependent protease La (LON) domain IPR003111

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 28 27

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 64   Mitochondrion 3 0.038 0.779 NON-PLANT 64