3 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005524 | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
GO:0003774 | motor activity | Catalysis of the generation of force resulting either in movement along a microfilament or microtubule, or in torque resulting in membrane scission, coupled to the hydrolysis of a nucleoside triphosphate. |
GO:0016459 | myosin complex | A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes. |
46 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|mdm:103455646 | 1 | 209 | + | 209 | Gaps:2 | 38.29 | 551 | 85.78 | 2e-126 | myosin-15-like |
blastp_kegg | lcl|pper:PRUPE_ppa000188mg | 1 | 209 | + | 209 | none | 13.96 | 1497 | 87.56 | 6e-125 | hypothetical protein |
blastp_kegg | lcl|pxb:103952847 | 1 | 209 | + | 209 | Gaps:2 | 13.95 | 1513 | 88.15 | 9e-125 | myosin-15-like |
blastp_kegg | lcl|pmum:103320649 | 1 | 209 | + | 209 | none | 13.81 | 1513 | 87.56 | 1e-124 | myosin-15 |
blastp_kegg | lcl|cmo:103488524 | 1 | 209 | + | 209 | none | 13.80 | 1515 | 87.56 | 2e-124 | myosin-15 |
blastp_kegg | lcl|mdm:103455770 | 1 | 209 | + | 209 | Gaps:2 | 13.95 | 1513 | 86.73 | 2e-123 | myosin-15 |
blastp_kegg | lcl|fve:101298726 | 1 | 209 | + | 209 | Gaps:2 | 13.85 | 1524 | 87.68 | 3e-123 | myosin-H heavy chain-like |
blastp_kegg | lcl|csv:101210527 | 1 | 209 | + | 209 | none | 13.80 | 1515 | 86.60 | 5e-123 | myosin-H heavy chain-like |
blastp_kegg | lcl|pxb:103929656 | 1 | 209 | + | 209 | Gaps:2 | 13.96 | 1511 | 86.73 | 1e-121 | myosin-15-like |
blastp_kegg | lcl|pop:POPTR_0006s23660g | 1 | 209 | + | 209 | Gaps:1 | 16.37 | 1283 | 85.71 | 3e-121 | POPTRDRAFT_561578 POPTRDRAFT_561579 hypothetical protein |
blastp_pdb | 1mmn_A | 1 | 209 | + | 209 | Gaps:9 | 27.56 | 762 | 43.81 | 2e-51 | mol:protein length:762 MYOSIN |
blastp_pdb | 1mmg_A | 1 | 209 | + | 209 | Gaps:9 | 27.56 | 762 | 43.81 | 3e-51 | mol:protein length:762 MYOSIN |
blastp_pdb | 1lvk_A | 1 | 209 | + | 209 | Gaps:9 | 27.56 | 762 | 43.81 | 3e-51 | mol:protein length:762 MYOSIN |
blastp_pdb | 1mma_A | 1 | 209 | + | 209 | Gaps:9 | 27.56 | 762 | 43.81 | 3e-51 | mol:protein length:762 MYOSIN |
blastp_pdb | 3mkd_A | 52 | 209 | + | 158 | Gaps:5 | 23.27 | 692 | 51.55 | 6e-51 | mol:protein length:692 Myosin-2 heavy chain |
blastp_pdb | 2y9e_X | 52 | 209 | + | 158 | Gaps:5 | 21.24 | 758 | 51.55 | 8e-51 | mol:protein length:758 MYOSIN-2 |
blastp_pdb | 3bz9_A | 52 | 209 | + | 158 | Gaps:5 | 21.13 | 762 | 51.55 | 8e-51 | mol:protein length:762 Myosin-2 heavy chain non muscle |
blastp_pdb | 3bz8_A | 52 | 209 | + | 158 | Gaps:5 | 21.13 | 762 | 51.55 | 8e-51 | mol:protein length:762 Myosin-2 heavy chain non muscle |
blastp_pdb | 3bz7_A | 52 | 209 | + | 158 | Gaps:5 | 21.13 | 762 | 51.55 | 8e-51 | mol:protein length:762 Myosin-2 heavy chain non muscle |
blastp_pdb | 1yv3_A | 52 | 209 | + | 158 | Gaps:5 | 21.13 | 762 | 51.55 | 8e-51 | mol:protein length:762 Myosin II heavy chain |
blastp_uniprot_sprot | sp|Q0WPU1|MYO15_ARATH | 1 | 209 | + | 209 | none | 13.73 | 1522 | 78.95 | 2e-113 | Myosin-15 OS Arabidopsis thaliana GN XI-I PE 2 SV 1 |
blastp_uniprot_sprot | sp|F4IRU3|MYO12_ARATH | 6 | 209 | + | 204 | Gaps:1 | 13.05 | 1556 | 67.49 | 4e-91 | Myosin-12 OS Arabidopsis thaliana GN XI-F PE 2 SV 1 |
blastp_uniprot_sprot | sp|F4HWY6|MYO11_ARATH | 6 | 209 | + | 204 | Gaps:1 | 13.28 | 1529 | 66.50 | 4e-90 | Myosin-11 OS Arabidopsis thaliana GN XI-E PE 3 SV 1 |
blastp_uniprot_sprot | sp|F4HXP9|MYO9_ARATH | 6 | 209 | + | 204 | Gaps:1 | 13.20 | 1538 | 67.00 | 1e-89 | Myosin-9 OS Arabidopsis thaliana GN XI-C PE 2 SV 1 |
blastp_uniprot_sprot | sp|F4K5J1|MYO17_ARATH | 6 | 209 | + | 204 | Gaps:1 | 13.26 | 1531 | 67.00 | 6e-88 | Myosin-17 OS Arabidopsis thaliana GN XI-K PE 2 SV 2 |
blastp_uniprot_sprot | sp|Q9LKB9|MYO6_ARATH | 6 | 209 | + | 204 | Gaps:1 | 13.49 | 1505 | 66.01 | 1e-87 | Myosin-6 OS Arabidopsis thaliana GN XI-2 PE 1 SV 1 |
blastp_uniprot_sprot | sp|F4I460|MYO8_ARATH | 6 | 209 | + | 204 | Gaps:2 | 13.60 | 1500 | 65.69 | 2e-86 | Myosin-8 OS Arabidopsis thaliana GN XI-B PE 3 SV 1 |
blastp_uniprot_sprot | sp|F4JM19|MYO14_ARATH | 2 | 209 | + | 208 | Gaps:1 | 13.65 | 1516 | 63.29 | 1e-84 | Myosin-14 OS Arabidopsis thaliana GN XI-H PE 3 SV 1 |
blastp_uniprot_sprot | sp|Q39160|MYO5_ARATH | 6 | 209 | + | 204 | Gaps:3 | 13.22 | 1520 | 64.18 | 6e-82 | Myosin-5 OS Arabidopsis thaliana GN XI-1 PE 1 SV 1 |
blastp_uniprot_sprot | sp|F4I5Q6|MYO7_ARATH | 6 | 209 | + | 204 | Gaps:2 | 11.68 | 1730 | 64.36 | 1e-81 | Myosin-7 OS Arabidopsis thaliana GN XI-A PE 3 SV 1 |
11 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
PANTHER | 6 | 209 | 204 | PTHR13140 | none | none | none |
Pfam | 61 | 209 | 149 | PF00063 | none | Myosin head (motor domain) | IPR001609 |
Pfam | 7 | 43 | 37 | PF02736 | none | Myosin N-terminal SH3-like domain | IPR004009 |
ProSiteProfiles | 59 | 219 | 161 | PS51456 | none | Myosin motor domain profile. | IPR001609 |
Gene3D | 145 | 177 | 33 | G3DSA:3.40.50.300 | none | none | IPR027417 |
PANTHER | 6 | 209 | 204 | PTHR13140:SF256 | none | none | none |
PRINTS | 89 | 108 | 20 | PR00193 | none | Myosin heavy chain signature | IPR001609 |
PRINTS | 193 | 219 | 27 | PR00193 | none | Myosin heavy chain signature | IPR001609 |
PRINTS | 146 | 171 | 26 | PR00193 | none | Myosin heavy chain signature | IPR001609 |
SMART | 53 | 219 | 167 | SM00242 | none | Myosin. Large ATPases. | IPR001609 |
SUPERFAMILY | 28 | 209 | 182 | SSF52540 | none | none | IPR027417 |
17 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran1_2003_QTL2_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1B0H8U_259 | s_1CB1VL_554 | 17 | 0 | 87 | lod | 3,3 | 8,7 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf | Qrob_Chr02 | 2 | s_1AQA4Z_1644 | s_1AK5QX_947 | 53.67 | 14,01 | 79,68 | lod | 5.6594 | 0.03 |
Bourran1_2004_QTL2_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1AW12F_382 | s_1A77MR_223 | 42 | 6 | 64 | lod | 3,6 | 9,6 |
Bourran2_2002_QTL9_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1BFNDA_375 | s_1A3VA1_2139 | 32,5 | 17 | 62 | lod | 3,1 | 4,2 |
Bourran2_2003_QTL8_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1ANG6_1446 | v_11270_161 | 40 | 0 | 72 | lod | 4,4 | 9,9 |
Bourran2_2014_nP_A4 | Qrob_Chr11 | 11 | s_1B58GB_1413 | s_1A5BYY_1671 | 11,15 | 0 | 42,38 | lod | 1,8913 | 4,5 |
Bourran2_2015_nP_A4 | Qrob_Chr02 | 2 | s_1A0FUE_1868 | s_1A1UAI_500 | 20,64 | 20,47 | 21,36 | lod | 5.8 | 10.9 |
Bourran2_2015_nPriLBD_A4 | Qrob_Chr02 | 2 | s_1CP5DI_1183 | s_1A63ZX_1277 | 24,87 | 24,63 | 26,18 | lod | 3.8 | 7 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf | Qrob_Chr02 | 2 | s_1AEP21_172 | v_6048_204 | 46.33 | 22,5 | 65,23 | lod | 4.972 | 0.03 |
Bourran2_2015_nEpis_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 34,94 | 34,88 | 37,45 | lod | 3.1 | 7 |
Bourran1_2003_QTL1_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1AR8KI_1183 | s_1B0QB1_473 | 22 | 6 | 41 | lod | 4,2 | 11,5 |
Bourran1_2004_QTL3_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1B0H8U_259 | s_1CB1VL_554 | 17 | 0 | 46 | lod | 2,9 | 6,4 |
Bourran2_2015_nEpiBC_A4 | Qrob_Chr07 | 7 | s_1DP9TW_798 | v_8128_173 | 22,61 | 22,14 | 22,73 | lod | 3.1 | 8.5 |
Champenoux_2015_nEpis_A4 | Qrob_Chr02 | 2 | s_1BAGIZ_823 | s_1BN4CB_644 | 23,06 | 23,06 | 23,06 | lod | 4.9 | 11 |
Champenoux_2015_nP_A4 | Qrob_Chr02 | 2 | s_1BN4CB_644 | v_508_128 | 23,76 | 23,06 | 24,51 | lod | 2.8 | 6.2 |
Champenoux_2015_nPriLBD_A4 | Qrob_Chr02 | 2 | s_1CP5DI_1183 | s_1A63ZX_1277 | 25,35 | 24,63 | 26,18 | lod | 4.0 | 8.7 |
Champenoux_2015_nSecLBD_A4 | Qrob_Chr02 | 2 | s_1AN4ZM_1665 | v_8587_238 | 18,52 | 18,89 | 18,27 | lod | 3.2 | 7.4 |