Protein : Qrob_P0303640.2 Q. robur
Protein Identifier  ? Qrob_P0303640.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K07767 - microtubule-severing ATPase [EC:3.6.4.3] Code Enzyme  EC:3.6.4.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 521  
Kegg Orthology  K07767
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0008017 microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
GO:0051013 microtubule severing The process in which a microtubule is broken down into smaller segments.
GO:0008568 microtubule-severing ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100242880 1 520 + 520 none 99.81 521 88.46 0.0 katanin p60 ATPase-containing subunit-like
blastp_kegg lcl|cic:CICLE_v10025365mg 1 520 + 520 Gaps:1 99.81 522 88.68 0.0 hypothetical protein
blastp_kegg lcl|pxb:103931296 1 520 + 520 Gaps:1 100.00 521 88.48 0.0 katanin p60 ATPase-containing subunit A1
blastp_kegg lcl|pxb:103952229 1 520 + 520 Gaps:1 100.00 521 88.29 0.0 katanin p60 ATPase-containing subunit A1-like
blastp_kegg lcl|tcc:TCM_028585 8 513 + 506 Gaps:1 86.08 589 90.14 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1
blastp_kegg lcl|cit:102629418 1 520 + 520 Gaps:1 99.81 522 88.48 0.0 katanin p60 ATPase-containing subunit A1-like
blastp_kegg lcl|csv:101222776 1 520 + 520 Gaps:3 100.00 521 88.68 0.0 katanin p60 ATPase-containing subunit A1-like
blastp_kegg lcl|cmo:103499756 1 520 + 520 Gaps:3 73.90 705 88.87 0.0 katanin p60 ATPase-containing subunit A1
blastp_kegg lcl|pmum:103328004 1 520 + 520 Gaps:1 56.82 917 87.72 0.0 katanin p60 ATPase-containing subunit A1
blastp_kegg lcl|mdm:103410578 1 520 + 520 Gaps:1 100.00 521 87.72 0.0 katanin p60 ATPase-containing subunit A1-like
blastp_pdb 3d8b_B 218 520 + 303 Gaps:24 81.51 357 47.42 3e-83 mol:protein length:357 Fidgetin-like protein 1
blastp_pdb 3d8b_A 218 520 + 303 Gaps:24 81.51 357 47.42 3e-83 mol:protein length:357 Fidgetin-like protein 1
blastp_pdb 2qpa_C 193 518 + 326 Gaps:42 98.59 355 43.43 3e-82 mol:protein length:355 Vacuolar protein sorting-associated protein 4
blastp_pdb 2qpa_B 193 518 + 326 Gaps:42 98.59 355 43.43 3e-82 mol:protein length:355 Vacuolar protein sorting-associated protein 4
blastp_pdb 2qpa_A 193 518 + 326 Gaps:42 98.59 355 43.43 3e-82 mol:protein length:355 Vacuolar protein sorting-associated protein 4
blastp_pdb 2qp9_X 193 518 + 326 Gaps:42 98.59 355 43.43 3e-82 mol:protein length:355 Vacuolar protein sorting-associated protein 4
blastp_pdb 2rko_A 220 518 + 299 Gaps:36 95.77 331 44.79 5e-79 mol:protein length:331 Vacuolar protein sorting-associated protein 4
blastp_pdb 3eih_C 218 518 + 301 Gaps:36 93.82 340 44.51 1e-78 mol:protein length:340 Vacuolar protein sorting-associated protein 4
blastp_pdb 3eih_B 218 518 + 301 Gaps:36 93.82 340 44.51 1e-78 mol:protein length:340 Vacuolar protein sorting-associated protein 4
blastp_pdb 3eih_A 218 518 + 301 Gaps:36 93.82 340 44.51 1e-78 mol:protein length:340 Vacuolar protein sorting-associated protein 4
blastp_uniprot_sprot sp|Q9SEX2|KTNA1_ARATH 5 520 + 516 Gaps:3 98.85 523 85.49 0.0 Katanin p60 ATPase-containing subunit A1 OS Arabidopsis thaliana GN AAA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q1HGK7|KTNA1_CHICK 5 520 + 516 Gaps:31 99.80 492 55.19 2e-173 Katanin p60 ATPase-containing subunit A1 OS Gallus gallus GN KATNA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5U3S1|KATL1_DANRE 5 520 + 516 Gaps:29 99.80 488 54.41 2e-171 Katanin p60 ATPase-containing subunit A-like 1 OS Danio rerio GN katnal1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0IIR9|KTNA1_XENTR 5 520 + 516 Gaps:37 99.80 492 54.99 1e-170 Katanin p60 ATPase-containing subunit A1 OS Xenopus tropicalis GN katna1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4R407|KTNA1_MACFA 5 520 + 516 Gaps:32 99.80 491 54.29 1e-169 Katanin p60 ATPase-containing subunit A1 OS Macaca fascicularis GN KATNA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9PUL2|KTNA1_XENLA 5 518 + 514 Gaps:29 99.79 486 54.02 1e-169 Katanin p60 ATPase-containing subunit A1 (Fragment) OS Xenopus laevis GN katna1 PE 2 SV 1
blastp_uniprot_sprot sp|O75449|KTNA1_HUMAN 5 520 + 516 Gaps:32 99.80 491 54.29 1e-169 Katanin p60 ATPase-containing subunit A1 OS Homo sapiens GN KATNA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5RII9|KTNA1_DANRE 5 520 + 516 Gaps:34 99.79 485 54.96 5e-169 Katanin p60 ATPase-containing subunit A1 OS Danio rerio GN katna1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6E0V2|KTNA1_RAT 5 520 + 516 Gaps:32 99.80 491 53.88 3e-168 Katanin p60 ATPase-containing subunit A1 OS Rattus norvegicus GN Katna1 PE 1 SV 1
blastp_uniprot_sprot sp|O61577|KTNA1_STRPU 5 520 + 516 Gaps:15 99.81 516 50.68 8e-168 Katanin p60 ATPase-containing subunit A1 OS Strongylocentrotus purpuratus GN KATNA1 PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 9 79 71 PTHR23074:SF19 none none none
PANTHER 100 520 421 PTHR23074:SF19 none none none
Pfam 272 409 138 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
Gene3D 417 501 85 G3DSA:1.10.8.60 none none none
Hamap 7 520 514 MF_03023 none Meiotic spindle formation protein mei-1 [mei-1]. IPR028596
Gene3D 231 416 186 G3DSA:3.40.50.300 none none IPR027417
SMART 268 411 144 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Pfam 473 518 46 PF09336 none Vps4 C terminal oligomerisation domain IPR015415
PANTHER 100 520 421 PTHR23074 none none none
PANTHER 9 79 71 PTHR23074 none none none
SUPERFAMILY 232 517 286 SSF52540 none none IPR027417
ProSitePatterns 381 400 20 PS00674 none AAA-protein family signature. IPR003960

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting