2 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0008270 | zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
GO:0019789 | SUMO transferase activity | Catalysis of the transfer of SUMO from one protein to another via the reaction X-SUMO + Y --> Y-SUMO + X, where both X-SUMO and Y-SUMO are covalent linkages. |
11 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pxb:103935782 | 40 | 619 | + | 580 | Gaps:59 | 61.74 | 899 | 53.87 | 8e-150 | uncharacterized LOC103935782 |
blastp_kegg | lcl|vvi:100243215 | 23 | 619 | + | 597 | Gaps:66 | 60.76 | 920 | 52.77 | 3e-149 | uncharacterized LOC100243215 |
blastp_kegg | lcl|mdm:103439193 | 40 | 619 | + | 580 | Gaps:54 | 61.61 | 896 | 53.99 | 7e-149 | uncharacterized LOC103439193 |
blastp_kegg | lcl|mdm:103412327 | 40 | 619 | + | 580 | Gaps:54 | 80.64 | 687 | 53.61 | 2e-148 | uncharacterized LOC103412327 |
blastp_kegg | lcl|mdm:103411689 | 40 | 619 | + | 580 | Gaps:54 | 61.83 | 896 | 53.61 | 3e-146 | uncharacterized LOC103411689 |
blastp_kegg | lcl|tcc:TCM_047025 | 40 | 619 | + | 580 | Gaps:49 | 61.26 | 919 | 52.22 | 3e-143 | RING/U-box superfamily protein putative |
blastp_kegg | lcl|cit:102611381 | 40 | 616 | + | 577 | Gaps:81 | 60.23 | 870 | 51.72 | 7e-129 | uncharacterized LOC102611381 |
blastp_kegg | lcl|pxb:103953373 | 78 | 619 | + | 542 | Gaps:57 | 98.66 | 522 | 52.43 | 2e-123 | uncharacterized LOC103953373 |
blastp_kegg | lcl|cmo:103482791 | 40 | 593 | + | 554 | Gaps:63 | 60.56 | 857 | 49.13 | 3e-115 | uncharacterized LOC103482791 |
blastp_kegg | lcl|pper:PRUPE_ppa001401mg | 54 | 619 | + | 566 | Gaps:99 | 61.77 | 837 | 54.93 | 6e-114 | hypothetical protein |
blastp_uniprot_sprot | sp|Q12216|SIZ2_YEAST | 40 | 164 | + | 125 | Gaps:5 | 17.91 | 726 | 27.69 | 2e-06 | E3 SUMO-protein ligase SIZ2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN NFI1 PE 1 SV 1 |
5 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
PANTHER | 41 | 129 | 89 | PTHR10782 | none | none | none |
PANTHER | 609 | 617 | 9 | PTHR10782:SF4 | "UniPathway:UPA00886";signature_desc=SUBFAMILY NOT NAMED | none | IPR027229 |
PANTHER | 41 | 129 | 89 | PTHR10782:SF4 | "UniPathway:UPA00886";signature_desc=SUBFAMILY NOT NAMED | none | IPR027229 |
Pfam | 40 | 64 | 25 | PF02891 | "UniPathway:UPA00886" | MIZ/SP-RING zinc finger | IPR004181 |
PANTHER | 609 | 617 | 9 | PTHR10782 | none | none | none |
10 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran1_2004_QTL1_peak_Bud_burst_A4 | Qrob_Chr01 | 1 | s_1AMVCC_444 | s_1BE1VC_321 | 4 | 0 | 31 | lod | 3,2 | 7,4 |
Bourran2_2003_QTL8_peak_Bud_burst_A4 | Qrob_Chr01 | 1 | s_1AH7I_610 | s_1BE1VC_321 | 4,6 | 0 | 28 | lod | 3,5 | 7,4 |
Bourran2_2007_QTL6_peak_Bud_burst_3P | Qrob_Chr01 | 1 | s_1BE1VC_321 | s_1A5JRZ_890 | 5 | 0 | 25 | lod | 2,4 | 6 |
Bourran2_2014_nEpiBC_3P | Qrob_Chr01 | 1 | v_1588_550 | s_1AZJRA_1600 | 30,48 | 9,48 | 43,98 | lod | 2,3642 | 6,3 |
Bourran2_2014_nLBD*_A4 | Qrob_Chr08 | 8 | v_12498_318 | v_12364_308 | 34,91 | 16,12 | 53,62 | lod | 2,4961 | 5,2 |
Bourran2_2014_nSecLBD_3P | Qrob_Chr08 | 8 | s_1BN2OD_551 | s_1B5AYF_599 | 17,17 | 0 | 43,51 | lod | 1,9229 | 4,4 |
Bourran2_2014_rEpiBC*_A4 | Qrob_Chr08 | 8 | v_12498_318 | v_12364_308 | 35,77 | 14,11 | 55,31 | lod | 2,9413 | 6,2 |
Bourran2_2015_nEpiBC_3P | Qrob_Chr12 | 12 | s_1B73S5_217 | v_7050_211 | 28,31 | 26,37 | 28,45 | lod | 4.5 | 11.6 |
Bourran2_2015_rEpiBC_3P | Qrob_Chr08 | 8 | s_A9TNV_543 | v_11837_70 | 9,93 | 9,83 | 11,15 | lod | 3.3 | 7.3 |
Bourran2_2014_nSeqBC*_A4 | Qrob_Chr01 | 1 | s_1CFE4C_2114 | s_1BDNCB_819 | 15,25 | 2 | 28,5 | lod | 2,9903 | 8,3 |