Protein : Qrob_P0298560.2 Q. robur
Protein Identifier  ? Qrob_P0298560.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K07877 - Ras-related protein Rab-2A Gene Prediction Quality  validated
Protein length 

Sequence

Length: 212  
Kegg Orthology  K07877
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006913 nucleocytoplasmic transport The directed movement of molecules between the nucleus and the cytoplasm.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103491719 1 211 + 211 none 100.00 211 98.10 3e-153 ras-related protein RABB1b
blastp_kegg lcl|csv:101222655 1 211 + 211 none 100.00 211 97.63 6e-153 ras-related protein RABB1b-like
blastp_kegg lcl|tcc:TCM_017012 1 211 + 211 none 100.00 211 97.16 4e-151 GTP-binding 2
blastp_kegg lcl|rcu:RCOM_1478360 1 210 + 210 none 99.53 211 97.14 7e-151 protein with unknown function (EC:3.1.4.12)
blastp_kegg lcl|pop:POPTR_0009s16120g 1 210 + 210 none 99.53 211 96.67 6e-149 POPTRDRAFT_648984 GTP-BINDING 2 family protein
blastp_kegg lcl|pper:PRUPE_ppa011443mg 1 211 + 211 Gaps:1 100.00 210 96.67 6e-149 hypothetical protein
blastp_kegg lcl|fve:101313439 1 210 + 210 none 99.53 211 95.71 7e-149 ras-related protein RABB1b-like
blastp_kegg lcl|pmum:103329764 1 210 + 210 Gaps:1 99.52 210 96.65 3e-148 ras-related protein RABB1b
blastp_kegg lcl|sot:102586319 1 210 + 210 none 99.53 211 94.76 6e-147 ras-related protein RABB1b-like
blastp_kegg lcl|sly:101257123 1 210 + 210 none 99.53 211 94.29 7e-147 ras-related protein RABB1b-like
blastp_pdb 2a5j_A 5 176 + 172 none 90.05 191 82.56 2e-102 mol:protein length:191 Ras-related protein Rab-2B
blastp_pdb 1z0a_D 2 169 + 168 none 96.55 174 82.74 9e-102 mol:protein length:174 Ras-related protein Rab-2A
blastp_pdb 1z0a_C 2 169 + 168 none 96.55 174 82.74 9e-102 mol:protein length:174 Ras-related protein Rab-2A
blastp_pdb 1z0a_B 2 169 + 168 none 96.55 174 82.74 9e-102 mol:protein length:174 Ras-related protein Rab-2A
blastp_pdb 1z0a_A 2 169 + 168 none 96.55 174 82.74 9e-102 mol:protein length:174 Ras-related protein Rab-2A
blastp_pdb 4drz_A 2 172 + 171 none 87.24 196 67.25 9e-81 mol:protein length:196 Ras-related protein Rab-14
blastp_pdb 1z0f_A 2 170 + 169 none 94.41 179 67.46 1e-80 mol:protein length:179 RAB14 member RAS oncogene family
blastp_pdb 2bme_D 2 177 + 176 none 94.62 186 58.52 4e-71 mol:protein length:186 RAS-RELATED PROTEIN RAB4A
blastp_pdb 2bme_C 2 177 + 176 none 94.62 186 58.52 4e-71 mol:protein length:186 RAS-RELATED PROTEIN RAB4A
blastp_pdb 2bme_B 2 177 + 176 none 94.62 186 58.52 4e-71 mol:protein length:186 RAS-RELATED PROTEIN RAB4A
blastp_uniprot_sprot sp|Q38922|RAB1B_ARATH 1 211 + 211 none 100.00 211 91.47 4e-145 Ras-related protein RABB1b OS Arabidopsis thaliana GN RABB1B PE 2 SV 1
blastp_uniprot_sprot sp|P92963|RAB1C_ARATH 1 211 + 211 none 100.00 211 87.20 2e-136 Ras-related protein RABB1c OS Arabidopsis thaliana GN RABB1C PE 2 SV 1
blastp_uniprot_sprot sp|P49104|RAB2B_MAIZE 1 192 + 192 none 91.43 210 87.50 1e-124 Ras-related protein Rab-2-B OS Zea mays GN RAB2B PE 2 SV 1
blastp_uniprot_sprot sp|Q39570|YPTC4_CHLRE 1 210 + 210 Gaps:3 100.00 213 81.22 2e-124 GTP-binding protein YPTC4 OS Chlamydomonas reinhardtii GN YPTC4 PE 3 SV 1
blastp_uniprot_sprot sp|P36863|YPTV4_VOLCA 1 210 + 210 Gaps:3 100.00 213 81.22 2e-124 GTP-binding protein yptV4 OS Volvox carteri GN YPTV4 PE 3 SV 1
blastp_uniprot_sprot sp|P49103|RAB2A_MAIZE 1 192 + 192 none 91.87 209 86.98 2e-123 Ras-related protein Rab-2-A OS Zea mays GN RAB2A PE 1 SV 1
blastp_uniprot_sprot sp|P53994|RAB2A_MOUSE 1 210 + 210 Gaps:2 100.00 212 74.53 4e-114 Ras-related protein Rab-2A OS Mus musculus GN Rab2a PE 1 SV 1
blastp_uniprot_sprot sp|Q01971|RAB2A_RABIT 1 210 + 210 Gaps:2 100.00 212 74.53 2e-113 Ras-related protein Rab-2A OS Oryctolagus cuniculus GN RAB2A PE 2 SV 1
blastp_uniprot_sprot sp|Q90965|RAB2A_CHICK 1 193 + 193 Gaps:3 89.62 212 81.58 2e-113 Ras-related protein Rab-2A OS Gallus gallus GN RAB2A PE 2 SV 1
blastp_uniprot_sprot sp|Q5R6B6|RAB2A_PONAB 1 193 + 193 Gaps:3 89.62 212 81.58 2e-113 Ras-related protein Rab-2A OS Pongo abelii GN RAB2A PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 7 170 164 SM00175 none Rab subfamily of small GTPases IPR003579
Pfam 8 168 161 PF00071 none Ras family IPR001806
SMART 12 211 200 SM00176 none Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases IPR002041
SUPERFAMILY 1 180 180 SSF52540 none none IPR027417
SMART 9 170 162 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
TIGRFAM 7 160 154 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
ProSiteProfiles 2 210 209 PS51419 none small GTPase Rab1 family profile. none
SMART 4 170 167 SM00173 none Ras subfamily of RAS small GTPases IPR020849
PANTHER 1 210 210 PTHR24073:SF359 none none none
PRINTS 110 123 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 30 46 17 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 7 28 22 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 48 70 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 145 167 23 PR00449 none Transforming protein P21 ras signature IPR001806
Gene3D 2 197 196 G3DSA:3.40.50.300 none none IPR027417
PANTHER 1 210 210 PTHR24073 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting