Protein : Qrob_P0297640.2 Q. robur
Protein Identifier  ? Qrob_P0297640.2 Organism . Name  Quercus robur
Score  91.3 Score Type  egn
Protein Description  (M=2) PTHR10826//PTHR10826:SF5 - COMPLEMENT COMPONENT 1 // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 243  
Kegg Orthology  K15414
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005759 mitochondrial matrix The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_036929 1 242 + 242 Gaps:26 100.00 234 61.11 8e-98 Mitochondrial glycoprotein family protein putative
blastp_kegg lcl|pop:POPTR_0018s02310g 1 242 + 242 Gaps:28 100.00 238 61.34 4e-97 POPTRDRAFT_261271 hypothetical protein
blastp_kegg lcl|fve:101295014 1 242 + 242 Gaps:27 100.00 235 62.13 2e-95 uncharacterized protein At2g39795 mitochondrial-like
blastp_kegg lcl|pper:PRUPE_ppa015490mg 1 242 + 242 Gaps:40 100.00 246 59.35 4e-92 hypothetical protein
blastp_kegg lcl|pmum:103320760 1 242 + 242 Gaps:38 100.00 246 59.35 9e-92 uncharacterized protein At2g39795 mitochondrial
blastp_kegg lcl|pxb:103953840 3 242 + 240 Gaps:17 91.39 244 58.30 1e-91 uncharacterized protein At2g39795 mitochondrial-like
blastp_kegg lcl|mdm:103441859 3 242 + 240 Gaps:17 91.39 244 58.74 2e-91 uncharacterized protein At2g39795 mitochondrial
blastp_kegg lcl|pvu:PHAVU_001G046600g 2 241 + 240 Gaps:22 98.71 233 59.13 7e-91 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0922250 1 242 + 242 Gaps:21 100.00 225 62.22 1e-90 hypothetical protein
blastp_kegg lcl|gmx:100786969 2 241 + 240 Gaps:23 98.72 234 58.44 5e-88 uncharacterized LOC100786969
blastp_pdb 3qv0_A 191 239 + 49 none 21.59 227 44.90 1e-06 mol:protein length:227 Mitochondrial acidic protein MAM33
blastp_uniprot_sprot sp|Q8W487|YB95_ARATH 8 242 + 235 Gaps:40 88.40 250 31.22 3e-14 Uncharacterized protein At2g39795 mitochondrial OS Arabidopsis thaliana GN At2g39795 PE 1 SV 1
blastp_uniprot_sprot sp|O22288|Y2979_ARATH 35 241 + 207 Gaps:36 77.92 240 28.34 8e-12 Uncharacterized protein At2g39790 mitochondrial OS Arabidopsis thaliana GN At2g39790 PE 3 SV 2
blastp_uniprot_sprot sp|O94675|MAM33_SCHPO 43 241 + 199 Gaps:52 78.44 269 27.01 1e-08 Mitochondrial acidic protein mam33 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC776.07 PE 3 SV 1
blastp_uniprot_sprot sp|P40513|MAM33_YEAST 191 239 + 49 none 18.42 266 44.90 6e-06 Mitochondrial acidic protein MAM33 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN MAM33 PE 1 SV 1
rpsblast_cdd gnl|CDD|202207 49 240 + 192 Gaps:44 98.02 202 26.26 6e-12 pfam02330 MAM33 Mitochondrial glycoprotein. This mitochondrial matrix protein family contains members of the MAM33 family which bind to the globular 'heads' of C1Q. It is thought to be involved in mitochondrial oxidative phosphorylation and in nucleus-mitochondrion interactions.
rpsblast_kog gnl|CDD|37747 5 242 + 238 Gaps:38 91.25 263 32.08 1e-38 KOG2536 KOG2536 KOG2536 MAM33 mitochondrial matrix glycoprotein [Energy production and conversion].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 190 240 51 PF02330 none Mitochondrial glycoprotein IPR003428
PANTHER 1 242 242 PTHR10826 none none none
Gene3D 39 241 203 G3DSA:3.10.280.10 none none IPR003428
PANTHER 1 242 242 PTHR10826:SF5 none none none
SUPERFAMILY 41 241 201 SSF54529 none none IPR003428

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 19 18

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 31   Mitochondrion 1 0.013 0.952 NON-PLANT 31