Protein : Qrob_P0297620.2 Q. robur
Protein Identifier  ? Qrob_P0297620.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0260//KOG2806 - RNA polymerase II large subunit [Transcription]. // Chitinase [Carbohydrate transport and metabolism]. Code Enzyme  EC:3.2.1.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 385  
Kegg Orthology  K01183
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v100107291m 41 384 + 344 Gaps:56 77.17 495 51.31 1e-108 hypothetical protein
blastp_kegg lcl|cit:102621131 41 384 + 344 Gaps:56 78.93 484 51.31 4e-108 acidic mammalian chitinase-like
blastp_kegg lcl|pmum:103320757 116 384 + 269 Gaps:42 80.47 379 55.74 1e-106 chitotriosidase-1-like
blastp_kegg lcl|tcc:TCM_036927 36 384 + 349 Gaps:66 85.21 426 53.99 2e-105 Glycosyl hydrolase family protein with chitinase insertion domain putative
blastp_kegg lcl|mdm:103441854 133 384 + 252 Gaps:4 66.14 378 63.60 9e-105 acidic mammalian chitinase-like
blastp_kegg lcl|pxb:103953829 133 384 + 252 Gaps:4 66.14 378 62.80 2e-104 acidic mammalian chitinase-like
blastp_kegg lcl|pop:POPTR_0006s27770g 49 383 + 335 Gaps:64 79.87 477 50.39 4e-104 hypothetical protein
blastp_kegg lcl|mdm:103410588 133 384 + 252 Gaps:2 66.14 378 65.20 9e-104 acidic mammalian chitinase-like
blastp_kegg lcl|fve:101294727 116 384 + 269 Gaps:41 81.17 377 56.21 7e-102 chitotriosidase-1-like
blastp_kegg lcl|pxb:103942392 133 384 + 252 Gaps:2 66.14 378 64.40 3e-101 acidic mammalian chitinase-like
blastp_pdb 3aqu_D 133 383 + 251 Gaps:13 69.66 356 44.76 6e-62 mol:protein length:356 At4g19810
blastp_pdb 3aqu_C 133 383 + 251 Gaps:13 69.66 356 44.76 6e-62 mol:protein length:356 At4g19810
blastp_pdb 3aqu_B 133 383 + 251 Gaps:13 69.66 356 44.76 6e-62 mol:protein length:356 At4g19810
blastp_pdb 3aqu_A 133 383 + 251 Gaps:13 69.66 356 44.76 6e-62 mol:protein length:356 At4g19810
blastp_pdb 3alf_A 133 384 + 252 Gaps:10 71.39 353 39.68 6e-57 mol:protein length:353 Chitinase class V
blastp_pdb 3alg_A 133 384 + 252 Gaps:10 71.39 353 39.29 2e-56 mol:protein length:353 Chitinase class V
blastp_pdb 1wb0_A 137 384 + 248 Gaps:23 57.30 445 33.33 2e-35 mol:protein length:445 CHITOTRIOSIDASE 1
blastp_pdb 1waw_A 137 384 + 248 Gaps:23 57.30 445 33.33 2e-35 mol:protein length:445 CHITOTRIOSIDASE 1
blastp_pdb 3rme_B 137 384 + 248 Gaps:25 65.06 395 36.19 3e-35 mol:protein length:395 Acidic mammalian chitinase
blastp_pdb 3rme_A 137 384 + 248 Gaps:25 65.06 395 36.19 3e-35 mol:protein length:395 Acidic mammalian chitinase
blastp_uniprot_sprot sp|Q95M17|CHIA_BOVIN 137 384 + 248 Gaps:25 54.45 472 36.58 1e-35 Acidic mammalian chitinase OS Bos taurus GN CHIA PE 1 SV 1
blastp_uniprot_sprot sp|Q91XA9|CHIA_MOUSE 137 384 + 248 Gaps:25 54.33 473 36.19 2e-35 Acidic mammalian chitinase OS Mus musculus GN Chia PE 1 SV 2
blastp_uniprot_sprot sp|Q6RY07|CHIA_RAT 137 384 + 248 Gaps:25 54.33 473 36.19 6e-35 Acidic mammalian chitinase OS Rattus norvegicus GN Chia PE 2 SV 1
blastp_uniprot_sprot sp|Q13231|CHIT1_HUMAN 137 384 + 248 Gaps:23 54.72 466 33.33 1e-34 Chitotriosidase-1 OS Homo sapiens GN CHIT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q28042|OVGP1_BOVIN 132 384 + 253 Gaps:27 47.67 537 35.94 3e-34 Oviduct-specific glycoprotein (Fragment) OS Bos taurus GN OVGP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q91Z98|CH3L4_MOUSE 134 384 + 251 Gaps:25 64.68 402 35.00 7e-34 Chitinase-3-like protein 4 OS Mus musculus GN Chi3l4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9BZP6|CHIA_HUMAN 137 384 + 248 Gaps:25 53.99 476 35.80 1e-33 Acidic mammalian chitinase OS Homo sapiens GN CHIA PE 1 SV 1
blastp_uniprot_sprot sp|Q28542|OVGP1_SHEEP 132 384 + 253 Gaps:27 47.50 539 35.55 1e-33 Oviduct-specific glycoprotein OS Ovis aries GN OVGP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9D7Q1|CHIT1_MOUSE 134 384 + 251 Gaps:25 55.17 464 32.42 2e-33 Chitotriosidase-1 OS Mus musculus GN Chit1 PE 1 SV 2
blastp_uniprot_sprot sp|O35744|CH3L3_MOUSE 134 384 + 251 Gaps:25 65.33 398 35.77 3e-33 Chitinase-3-like protein 3 OS Mus musculus GN Chi3l3 PE 1 SV 2

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 119 383 265 SM00636 none none IPR011583
SUPERFAMILY 121 324 204 SSF51445 none none IPR017853
Gene3D 126 318 193 G3DSA:3.20.20.80 none none IPR013781
PANTHER 123 384 262 PTHR11177 none none none
Pfam 132 383 252 PF00704 none Glycosyl hydrolases family 18 IPR001223
Gene3D 319 381 63 G3DSA:3.10.50.10 none none IPR029070
ProSitePatterns 186 194 9 PS01095 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 18 active site. IPR001579
SUPERFAMILY 316 381 66 SSF54556 none none IPR029070
ProSiteProfiles 1 20 20 PS51257 none Prokaryotic membrane lipoprotein lipid attachment site profile. none

0 Localization

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting