Protein : Qrob_P0297600.2 Q. robur
Protein Identifier  ? Qrob_P0297600.2 Organism . Name  Quercus robur
Score  8.1 Score Type  egn
Protein Description  (M=3) PTHR26402:SF423 - TWO-COMPONENT RESPONSE REGULATOR ARR10-RELATED (PTHR26402:SF423) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 232  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0000160 phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103410619 1 94 + 94 none 37.01 254 84.04 5e-46 two-component response regulator ARR12-like
blastp_kegg lcl|gmx:100809002 1 94 + 94 none 13.51 696 81.91 4e-45 two-component response regulator ARR12-like
blastp_kegg lcl|pxb:103953811 1 94 + 94 none 14.44 651 86.17 4e-45 two-component response regulator ARR12
blastp_kegg lcl|csv:101215220 1 94 + 94 none 13.66 688 82.98 5e-45 two-component response regulator ARR12-like
blastp_kegg lcl|cam:101508241 7 94 + 88 none 13.95 631 87.50 1e-44 two-component response regulator ARR12-like
blastp_kegg lcl|cmo:103493766 1 94 + 94 none 13.64 689 81.91 3e-44 two-component response regulator ARR12-like
blastp_kegg lcl|mdm:103441827 1 94 + 94 none 14.44 651 85.11 4e-44 two-component response regulator ARR14-like
blastp_kegg lcl|pxb:103942390 1 94 + 94 none 15.04 625 85.11 4e-44 two-component response regulator ARR12-like
blastp_kegg lcl|pmum:103320756 1 94 + 94 none 14.20 662 82.98 8e-44 two-component response regulator ARR12-like
blastp_kegg lcl|mdm:103440743 1 94 + 94 none 15.04 625 84.04 1e-43 two-component response regulator ARR12
blastp_pdb 2ayx_A 3 94 + 92 Gaps:12 39.37 254 38.00 9e-10 mol:protein length:254 Sensor kinase protein rcsC
blastp_pdb 2ayz_A 18 94 + 77 Gaps:3 57.14 133 42.11 4e-08 mol:protein length:133 Sensor kinase protein rcsC
blastp_pdb 3f7n_B 18 108 + 91 Gaps:6 72.66 128 34.41 3e-06 mol:protein length:128 Chemotaxis protein cheY
blastp_pdb 3f7n_A 18 108 + 91 Gaps:6 72.66 128 34.41 3e-06 mol:protein length:128 Chemotaxis protein cheY
blastp_uniprot_sprot sp|P62598|ARR12_ARATH 1 94 + 94 Gaps:1 15.60 596 81.72 5e-42 Two-component response regulator ARR12 OS Arabidopsis thaliana GN ARR12 PE 2 SV 2
blastp_uniprot_sprot sp|O49397|ARR10_ARATH 1 94 + 94 Gaps:1 16.85 552 80.65 1e-40 Two-component response regulator ARR10 OS Arabidopsis thaliana GN ARR10 PE 1 SV 1
blastp_uniprot_sprot sp|Q940D0|ARR1_ARATH 14 94 + 81 none 11.74 690 71.60 4e-30 Two-component response regulator ARR1 OS Arabidopsis thaliana GN ARR1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9ZWJ9|ARR2_ARATH 12 94 + 83 none 12.50 664 68.67 3e-29 Two-component response regulator ARR2 OS Arabidopsis thaliana GN ARR2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FXD6|ARR11_ARATH 15 94 + 80 none 15.36 521 68.75 7e-28 Two-component response regulator ARR11 OS Arabidopsis thaliana GN ARR11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FGT7|ARR18_ARATH 1 94 + 94 Gaps:1 14.65 635 66.67 3e-27 Two-component response regulator ARR18 OS Arabidopsis thaliana GN ARR18 PE 2 SV 2
blastp_uniprot_sprot sp|Q8L9Y3|ARR14_ARATH 12 94 + 83 Gaps:1 21.99 382 64.29 8e-27 Two-component response regulator ARR14 OS Arabidopsis thaliana GN ARR14 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FJ16|APRR4_ARATH 13 117 + 105 Gaps:4 34.59 292 39.60 7e-16 Putative two-component response regulator-like APRR4 OS Arabidopsis thaliana GN APRR4 PE 3 SV 1
blastp_uniprot_sprot sp|Q7Y0W5|EHD1_ORYSJ 9 94 + 86 none 25.22 341 38.37 5e-11 Two-component response regulator EHD1 OS Oryza sativa subsp. japonica GN EHD1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7Y0W3|EHD1_ORYSI 9 94 + 86 none 25.22 341 38.37 5e-11 Two-component response regulator EHD1 OS Oryza sativa subsp. indica PE 2 SV 1
rpsblast_cdd gnl|CDD|32386 18 94 + 77 Gaps:3 16.38 464 47.37 2e-12 COG2204 AtoC Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains [Signal transduction mechanisms].
rpsblast_cdd gnl|CDD|162545 20 94 + 75 Gaps:3 15.98 463 43.24 1e-09 TIGR01818 ntrC nitrogen regulation protein NR(I). This model represents NtrC a DNA-binding response regulator that is phosphorylated by NtrB and interacts with sigma-54. NtrC usually controls the expression of glutamine synthase GlnA and may be called GlnL GlnG etc.
rpsblast_cdd gnl|CDD|200976 20 94 + 75 Gaps:3 66.67 111 40.54 2e-09 pfam00072 Response_reg Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.
rpsblast_cdd gnl|CDD|185070 19 94 + 76 Gaps:3 16.89 444 41.33 8e-09 PRK15115 PRK15115 response regulator GlrR Provisional.
rpsblast_cdd gnl|CDD|182968 18 106 + 89 Gaps:11 8.49 919 38.46 9e-09 PRK11107 PRK11107 hybrid sensory histidine kinase BarA Provisional.
rpsblast_cdd gnl|CDD|29071 21 94 + 74 Gaps:3 64.60 113 41.10 4e-08 cd00156 REC Signal receiver domain originally thought to be unique to bacteria (CheY OmpR NtrC and PhoB) now recently identified in eukaroytes ETR1 Arabidopsis thaliana this domain receives the signal from the sensor partner in a two-component systems contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs usually found N-terminal to a DNA binding effector domain forms homodimers.

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 20 93 74 PF00072 "Reactome:REACT_14797" Response regulator receiver domain IPR001789
Gene3D 17 94 78 G3DSA:3.40.50.2300 none none none
PANTHER 4 94 91 PTHR26402 none none none
SMART 18 132 115 SM00448 "Reactome:REACT_14797" cheY-homologous receiver domain IPR001789
Phobius 166 187 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 17 94 78 SSF52172 none none IPR011006
PANTHER 4 94 91 PTHR26402:SF423 none none none
ProSiteProfiles 19 94 76 PS50110 "Reactome:REACT_14797" Response regulatory domain profile. IPR001789
Phobius 188 231 44 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 165 165 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 166 188 22

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting