Protein : Qrob_P0292960.2 Q. robur
Protein Identifier  ? Qrob_P0292960.2 Organism . Name  Quercus robur
Score  66.4 Score Type  egn
Protein Description  (M=6) KOG0834//KOG0835 - CDK9 kinase-activating protein cyclin T [Cell cycle control cell division chromosome partitioning]. // Cyclin L [General function prediction only]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 190  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.
GO:0019901 protein kinase binding Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10031535mg 7 172 + 166 Gaps:8 40.98 410 72.02 3e-73 hypothetical protein
blastp_kegg lcl|cit:102614657 7 172 + 166 Gaps:8 37.75 445 72.02 5e-73 cyclin-L1-1-like
blastp_kegg lcl|vvi:100241975 7 174 + 168 Gaps:9 37.47 451 71.01 2e-72 cyclin-L1-1-like
blastp_kegg lcl|gmx:100815690 7 169 + 163 Gaps:6 37.28 448 70.06 2e-71 cyclin-L1-1-like
blastp_kegg lcl|pper:PRUPE_ppa005678mg 7 170 + 164 Gaps:9 36.83 448 71.52 2e-70 hypothetical protein
blastp_kegg lcl|mdm:103434000 7 175 + 169 Gaps:5 38.57 446 66.86 1e-69 cyclin-L1-1
blastp_kegg lcl|csv:101207220 7 168 + 162 Gaps:4 37.47 443 66.27 3e-69 cyclin-L1-1-like
blastp_kegg lcl|cmo:103492172 7 168 + 162 Gaps:4 37.47 443 65.66 1e-68 cyclin-L1-1
blastp_kegg lcl|pvu:PHAVU_007G183500g 7 168 + 162 Gaps:6 37.14 447 68.07 1e-68 hypothetical protein
blastp_kegg lcl|pmum:103344704 7 170 + 164 Gaps:9 36.18 456 69.70 6e-68 cyclin-L1-1
blastp_uniprot_sprot sp|Q8RWV3|CCL11_ARATH 7 180 + 174 Gaps:18 38.94 416 59.88 9e-50 Cyclin-L1-1 OS Arabidopsis thaliana GN CYCL1-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9AS36|CCL11_ORYSJ 7 164 + 158 Gaps:9 34.89 427 56.38 3e-42 Cyclin-L1-1 OS Oryza sativa subsp. japonica GN CYCL1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7ZVX0|CCNL1_DANRE 7 65 + 59 none 11.85 498 45.76 2e-10 Cyclin-L1 OS Danio rerio GN ccnl1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6GN15|CCNL1_XENLA 7 71 + 65 none 13.10 496 40.00 6e-10 Cyclin-L1 OS Xenopus laevis GN ccnl1 PE 2 SV 2
blastp_uniprot_sprot sp|Q5BKF8|CCNL2_XENTR 7 69 + 63 none 12.68 497 39.68 7e-10 Cyclin-L2 OS Xenopus tropicalis GN ccnl2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9JJA7|CCNL2_MOUSE 7 69 + 63 none 12.16 518 39.68 8e-10 Cyclin-L2 OS Mus musculus GN Ccnl2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5I0H5|CCNL2_RAT 7 68 + 62 none 11.92 520 40.32 9e-10 Cyclin-L2 OS Rattus norvegicus GN Ccnl2 PE 2 SV 2
blastp_uniprot_sprot sp|Q96S94|CCNL2_HUMAN 7 69 + 63 none 12.12 520 39.68 9e-10 Cyclin-L2 OS Homo sapiens GN CCNL2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5ZJP9|CCNL1_CHICK 7 69 + 63 none 11.80 534 38.10 2e-09 Cyclin-L1 OS Gallus gallus GN CCNL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9R1Q2|CCNL1_RAT 7 71 + 65 none 12.33 527 40.00 2e-07 Cyclin-L1 OS Rattus norvegicus GN Ccnl1 PE 1 SV 1
rpsblast_kog gnl|CDD|36053 6 189 + 184 Gaps:8 50.68 367 29.03 2e-23 KOG0835 KOG0835 KOG0835 Cyclin L [General function prediction only].
rpsblast_kog gnl|CDD|36052 7 103 + 97 Gaps:4 31.27 323 20.79 6e-07 KOG0834 KOG0834 KOG0834 CDK9 kinase-activating protein cyclin T [Cell cycle control cell division chromosome partitioning].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 14 21 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 7 76 70 SSF47954 none none IPR013763
PANTHER 6 180 175 PTHR10026 none none IPR015429
Phobius 3 13 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 6 180 175 PTHR10026:SF13 none none none
Phobius 22 189 168 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 3 0.667 0.100 NON-PLANT 21