Protein : Qrob_P0291400.2 Q. robur
Protein Identifier  ? Qrob_P0291400.2 Organism . Name  Quercus robur
Score  3.2 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 219  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100232998 1 217 + 217 none 100.00 217 85.25 3e-130 germin-like protein 2
blastp_kegg lcl|rcu:RCOM_1437110 1 217 + 217 Gaps:2 100.00 215 83.72 1e-126 Rhicadhesin receptor precursor putative (EC:1.15.1.1)
blastp_kegg lcl|pop:POPTR_0005s00310g 3 216 + 214 Gaps:3 96.82 220 85.45 1e-123 rhicadhesin receptor family protein
blastp_kegg lcl|tcc:TCM_026861 1 217 + 217 none 100.00 217 80.18 2e-121 Germin-like protein 10
blastp_kegg lcl|pop:POPTR_0013s00240g 1 217 + 217 Gaps:3 100.00 216 82.41 4e-120 POPTRDRAFT_834434 rhicadhesin receptor family protein
blastp_kegg lcl|fve:101311682 2 216 + 215 none 99.08 217 79.53 5e-120 germin-like protein 5-1-like
blastp_kegg lcl|pxb:103955832 1 216 + 216 none 99.54 217 78.70 7e-119 germin-like protein 5-1
blastp_kegg lcl|cic:CICLE_v10022159mg 4 217 + 214 none 97.72 219 77.57 4e-118 hypothetical protein
blastp_kegg lcl|cit:102617347 4 217 + 214 none 97.72 219 77.57 4e-118 germin-like protein subfamily 2 member 4-like
blastp_kegg lcl|fve:101311388 1 216 + 216 none 99.54 217 76.39 2e-117 germin-like protein 5-1-like
blastp_pdb 2et7_A 21 214 + 194 Gaps:6 98.51 201 50.51 2e-56 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_B 21 214 + 194 Gaps:6 98.51 201 50.51 2e-56 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 21 214 + 194 Gaps:6 98.51 201 50.51 2e-56 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 22 214 + 193 Gaps:6 98.01 201 50.76 3e-56 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 22 214 + 193 Gaps:6 98.01 201 50.76 3e-56 mol:protein length:201 OXALATE OXIDASE
blastp_pdb 2vqa_C 72 209 + 138 Gaps:6 36.57 361 26.52 7e-08 mol:protein length:361 SLL1358 PROTEIN
blastp_pdb 2vqa_B 72 209 + 138 Gaps:6 36.57 361 26.52 7e-08 mol:protein length:361 SLL1358 PROTEIN
blastp_pdb 2vqa_A 72 209 + 138 Gaps:6 36.57 361 26.52 7e-08 mol:protein length:361 SLL1358 PROTEIN
blastp_uniprot_sprot sp|Q6I544|GL52_ORYSJ 20 218 + 199 Gaps:2 89.14 221 78.68 9e-109 Germin-like protein 5-1 OS Oryza sativa subsp. japonica GN Os05g0277500 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M263|GL24_ARATH 20 217 + 198 Gaps:1 90.45 220 75.88 9e-108 Germin-like protein subfamily 2 member 4 OS Arabidopsis thaliana GN GLP10 PE 2 SV 1
blastp_uniprot_sprot sp|Q94EG3|NEC1_NICLS 7 218 + 212 Gaps:2 91.70 229 72.38 2e-106 Nectarin-1 OS Nicotiana langsdorffii x Nicotiana sanderae GN NECI PE 1 SV 1
blastp_uniprot_sprot sp|P94014|GL21_ARATH 19 217 + 199 none 90.87 219 73.37 4e-105 Germin-like protein subfamily 2 member 1 OS Arabidopsis thaliana GN GLP4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SPV5|NEC1_NICPL 7 218 + 212 Gaps:2 91.70 229 70.95 4e-104 Nectarin-1 OS Nicotiana plumbaginifolia GN NEC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FZ27|GL22_ARATH 20 217 + 198 none 90.41 219 71.21 2e-100 Germin-like protein subfamily 2 member 2 OS Arabidopsis thaliana GN At1g02335 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S8P4|RHRE_PEA 30 217 + 188 none 86.64 217 75.53 6e-98 Rhicadhesin receptor OS Pisum sativum GN GER1 PE 1 SV 2
blastp_uniprot_sprot sp|Q942A8|GL13_ORYSJ 4 217 + 214 Gaps:4 97.76 223 61.47 1e-89 Germin-like protein 1-3 OS Oryza sativa subsp. japonica GN GER8 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XZY1|GL32_ORYSJ 4 216 + 213 Gaps:4 97.75 222 59.91 9e-88 Putative germin-like protein 3-2 OS Oryza sativa subsp. japonica GN Os03g0651800 PE 3 SV 1
blastp_uniprot_sprot sp|O65252|GL25_ARATH 19 217 + 199 Gaps:3 92.02 213 61.73 3e-84 Probable germin-like protein subfamily 2 member 5 OS Arabidopsis thaliana GN At5g26700 PE 2 SV 2
rpsblast_cdd gnl|CDD|201069 60 207 + 148 Gaps:16 99.28 139 35.51 3e-28 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|197904 67 207 + 141 Gaps:3 95.89 146 35.71 5e-28 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 3 217 215 PTHR31238:SF4 none none none
PRINTS 137 157 21 PR00325 none Germin signature IPR001929
PRINTS 170 185 16 PR00325 none Germin signature IPR001929
PRINTS 107 127 21 PR00325 none Germin signature IPR001929
SMART 59 207 149 SM00835 none Cupin IPR006045
Gene3D 21 213 193 G3DSA:2.60.120.10 none none IPR014710
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 22 218 197 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 22 213 192 SSF51182 none none IPR011051
Pfam 62 206 145 PF00190 none Cupin IPR006045
ProSitePatterns 102 115 14 PS00725 none Germin family signature. IPR019780
PANTHER 3 217 215 PTHR31238 none none none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 3 16 14 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 21 20
SignalP_EUK 1 21 20
SignalP_GRAM_POSITIVE 1 21 20

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 1 0.966 0.018 NON-PLANT 21