Protein : Qrob_P0285550.2 Q. robur
Protein Identifier  ? Qrob_P0285550.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=15) PTHR10334 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 186  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005576 extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0018s03600g 1 185 + 185 Gaps:1 80.52 231 72.04 3e-94 POPTRDRAFT_261668 hypothetical protein
blastp_kegg lcl|tcc:TCM_036825 1 185 + 185 none 100.00 185 69.73 1e-84 STS14 protein putative
blastp_kegg lcl|rcu:RCOM_0107330 43 185 + 143 none 83.63 171 77.62 5e-79 STS14 protein precursor putative
blastp_kegg lcl|pmum:103325397 41 185 + 145 none 84.30 172 75.86 9e-78 pathogenesis-related protein PRMS-like
blastp_kegg lcl|fve:101293281 7 185 + 179 Gaps:10 97.16 176 69.01 3e-77 pathogenesis-related protein PR-1-like
blastp_kegg lcl|pper:PRUPE_ppa016600mg 41 185 + 145 none 98.64 147 75.17 4e-77 hypothetical protein
blastp_kegg lcl|mdm:103446143 42 185 + 144 none 61.54 234 72.22 9e-74 pathogenesis-related protein PR-1-like
blastp_kegg lcl|sot:102594592 26 185 + 160 none 76.56 209 63.75 5e-73 pathogenesis-related protein PR-1-like
blastp_kegg lcl|atr:s00019p00199860 41 185 + 145 none 79.67 182 66.90 3e-72 AMTR_s00019p00199860 hypothetical protein
blastp_kegg lcl|sly:101264239 42 185 + 144 none 79.56 181 68.75 2e-71 pathogenesis-related protein PR-1-like
blastp_pdb 1cfe_A 48 185 + 138 Gaps:3 100.00 135 47.41 1e-37 mol:protein length:135 PATHOGENESIS-RELATED PROTEIN P14A
blastp_pdb 1smb_A 53 185 + 133 Gaps:7 87.01 154 30.60 3e-12 mol:protein length:154 17kD fetal brain protein
blastp_pdb 2vzn_B 65 181 + 117 Gaps:22 60.09 218 29.77 1e-09 mol:protein length:218 VENOM ALLERGEN 3
blastp_pdb 2vzn_A 65 181 + 117 Gaps:22 60.09 218 29.77 1e-09 mol:protein length:218 VENOM ALLERGEN 3
blastp_pdb 1rc9_A 58 182 + 125 Gaps:24 61.09 221 31.11 2e-09 mol:protein length:221 cysteine-rich secretory protein
blastp_pdb 3q2u_A 70 178 + 109 Gaps:18 60.00 205 34.15 2e-09 mol:protein length:205 Glioma pathogenesis-related protein 1
blastp_pdb 3q2r_A 70 178 + 109 Gaps:18 60.00 205 34.15 2e-09 mol:protein length:205 Glioma pathogenesis-related protein 1
blastp_pdb 2dda_D 49 181 + 133 Gaps:18 66.82 211 27.66 8e-09 mol:protein length:211 Pseudechetoxin
blastp_pdb 2dda_C 49 181 + 133 Gaps:18 66.82 211 27.66 8e-09 mol:protein length:211 Pseudechetoxin
blastp_pdb 2dda_B 49 181 + 133 Gaps:18 66.82 211 27.66 8e-09 mol:protein length:211 Pseudechetoxin
blastp_uniprot_sprot sp|Q40374|PR1_MEDTR 53 185 + 133 Gaps:1 77.46 173 54.48 1e-48 Pathogenesis-related protein PR-1 OS Medicago truncatula GN PR-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q00008|PRMS_MAIZE 48 185 + 138 Gaps:2 83.83 167 51.43 1e-48 Pathogenesis-related protein PRMS OS Zea mays GN PRMS PE 2 SV 1
blastp_uniprot_sprot sp|P09042|PR1C_TOBAC 32 185 + 154 Gaps:7 95.83 168 45.96 2e-48 Pathogenesis-related protein 1C OS Nicotiana tabacum PE 2 SV 3
blastp_uniprot_sprot sp|P07053|PR1B_TOBAC 15 185 + 171 Gaps:9 98.81 168 45.18 8e-48 Pathogenesis-related protein 1B OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P35792|PR12_HORVU 48 185 + 138 Gaps:2 85.37 164 49.29 1e-46 Pathogenesis-related protein PRB1-2 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|Q05968|PR1_HORVU 48 185 + 138 Gaps:2 85.37 164 49.29 1e-46 Pathogenesis-related protein 1 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P08299|PR1A_TOBAC 48 185 + 138 none 82.14 168 47.10 6e-44 Pathogenesis-related protein 1A OS Nicotiana tabacum PE 1 SV 1
blastp_uniprot_sprot sp|P35793|PR13_HORVU 39 185 + 147 Gaps:2 90.85 164 46.31 1e-42 Pathogenesis-related protein PRB1-3 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P33154|PR1_ARATH 37 185 + 149 Gaps:3 90.68 161 44.52 1e-41 Pathogenesis-related protein 1 OS Arabidopsis thaliana GN At2g14610 PE 1 SV 1
blastp_uniprot_sprot sp|Q41359|PR1_SAMNI 45 185 + 141 Gaps:1 85.03 167 45.77 4e-41 Pathogenesis-related protein PR-1 type OS Sambucus nigra PE 2 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 44 185 142 G3DSA:3.40.33.10 none none IPR014044
PANTHER 49 185 137 PTHR10334 none none IPR001283
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PRINTS 70 88 19 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 117 130 14 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 168 181 14 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 141 157 17 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PANTHER 49 185 137 PTHR10334:SF170 none none none
ProSitePatterns 168 179 12 PS01010 none CRISP family signature 2. IPR018244
SMART 49 181 133 SM00198 none SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. IPR014044
SUPERFAMILY 21 185 165 SSF55797 none none IPR014044
Phobius 6 18 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PRINTS 115 130 16 PR00838 none Venom allergen 5 signature IPR002413
PRINTS 140 159 20 PR00838 none Venom allergen 5 signature IPR002413
PRINTS 70 88 19 PR00838 none Venom allergen 5 signature IPR002413
Phobius 19 22 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 23 185 163 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 58 173 116 PF00188 none Cysteine-rich secretory protein family IPR014044
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none

1 Localization

Analysis Start End Length
SignalP_EUK 1 27 26

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Secretory pathway 1 0.949 0.019 NON-PLANT 27