Protein : Qrob_P0285200.2 Q. robur
Protein Identifier  ? Qrob_P0285200.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 2.7.1.83 - Pseudouridine kinase. Code Enzyme  EC:2.7.1.83
Gene Prediction Quality  validated Protein length 

Sequence

Length: 424  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016773 phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103449822 2 423 + 422 Gaps:5 99.53 429 71.66 0.0 fructokinase-2
blastp_kegg lcl|pxb:103964419 2 423 + 422 Gaps:3 99.53 425 71.87 0.0 ribokinase
blastp_kegg lcl|pper:PRUPE_ppa006480mg 1 422 + 422 Gaps:22 99.76 409 74.02 0.0 hypothetical protein
blastp_kegg lcl|pmum:103335578 1 422 + 422 Gaps:6 38.38 1110 72.07 0.0 pentatricopeptide repeat-containing protein At1g53600 mitochondrial-like
blastp_kegg lcl|vvi:100257294 1 423 + 423 Gaps:5 100.00 426 68.54 0.0 pseudouridine kinase-like
blastp_kegg lcl|pop:POPTR_0004s15940g 1 423 + 423 Gaps:14 100.00 419 70.41 0.0 POPTRDRAFT_195347 pfkB-type carbohydrate kinase family protein
blastp_kegg lcl|fve:101312896 1 423 + 423 Gaps:7 18.80 2277 68.22 0.0 uncharacterized protein LOC101312896
blastp_kegg lcl|mtr:MTR_4g084100 25 423 + 399 Gaps:4 95.72 421 66.50 0.0 Sugar kinase putative
blastp_kegg lcl|cmo:103489607 1 423 + 423 Gaps:3 38.69 1101 63.38 3e-180 putative pentatricopeptide repeat-containing protein At3g18840
blastp_kegg lcl|pop:POPTR_0004s15880g 1 403 + 403 Gaps:13 95.90 415 70.85 3e-180 POPTRDRAFT_195342 hypothetical protein
blastp_pdb 3kzh_B 45 287 + 243 Gaps:20 67.99 328 27.80 1e-16 mol:protein length:328 Probable sugar kinase
blastp_pdb 3kzh_A 45 287 + 243 Gaps:20 67.99 328 27.80 1e-16 mol:protein length:328 Probable sugar kinase
blastp_pdb 2nwh_A 45 234 + 190 Gaps:4 59.94 317 26.84 5e-08 mol:protein length:317 carbohydrate kinase
blastp_uniprot_sprot sp|P30235|PSUK_ECOLI 45 403 + 359 Gaps:68 94.25 313 30.85 7e-18 Pseudouridine kinase OS Escherichia coli (strain K12) GN psuK PE 1 SV 2
blastp_uniprot_sprot sp|P33020|YEII_ECOLI 45 299 + 255 Gaps:20 64.92 362 25.53 1e-14 Uncharacterized sugar kinase YeiI OS Escherichia coli (strain K12) GN yeiI PE 3 SV 2
blastp_uniprot_sprot sp|Q8R1Q9|RBSK_MOUSE 73 294 + 222 Gaps:28 63.16 323 26.96 7e-07 Ribokinase OS Mus musculus GN Rbks PE 2 SV 1
blastp_uniprot_sprot sp|Q9K6K1|RBSK_BACHD 46 243 + 198 Gaps:10 65.99 294 25.26 3e-06 Ribokinase OS Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN rbsK PE 3 SV 1
blastp_uniprot_sprot sp|P44331|RBSK_HAEIN 64 292 + 229 Gaps:29 69.93 306 27.57 5e-06 Ribokinase OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN rbsK PE 3 SV 1
rpsblast_cdd gnl|CDD|29363 43 389 + 347 Gaps:60 99.65 288 37.98 2e-53 cd01941 YeiC_kinase_like YeiC-like sugar kinase. Found in eukaryotes and bacteria YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time..
rpsblast_cdd gnl|CDD|29358 45 391 + 347 Gaps:67 96.58 292 28.01 5e-24 cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution..
rpsblast_cdd gnl|CDD|30870 45 411 + 367 Gaps:68 99.36 311 25.24 5e-23 COG0524 RbsK Sugar kinases ribokinase family [Carbohydrate transport and metabolism].
rpsblast_cdd gnl|CDD|201137 45 389 + 345 Gaps:76 94.97 298 26.86 3e-21 pfam00294 PfkB pfkB family carbohydrate kinase. This family includes a variety of carbohydrate and pyrimidine kinases.
rpsblast_cdd gnl|CDD|162734 75 397 + 323 Gaps:68 89.08 293 31.80 8e-21 TIGR02152 D_ribokin_bact ribokinase. This model describes ribokinase an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not.
rpsblast_cdd gnl|CDD|182111 45 395 + 351 Gaps:65 92.01 313 29.51 3e-17 PRK09850 PRK09850 pseudouridine kinase Provisional.
rpsblast_cdd gnl|CDD|182165 45 299 + 255 Gaps:20 64.92 362 26.38 4e-17 PRK09954 PRK09954 putative kinase Provisional.
rpsblast_cdd gnl|CDD|29350 45 388 + 344 Gaps:90 97.28 294 27.97 1e-14 cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers like pectin and xylan as carbon sources..
rpsblast_cdd gnl|CDD|29351 45 390 + 346 Gaps:96 95.59 295 29.79 2e-13 cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose as are all FRKs but they catalyzes the conversion of fructose to fructose-6-phosphate which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria which phosphorylate fructose to fructose-1-phosphate..
rpsblast_cdd gnl|CDD|29364 44 389 + 346 Gaps:83 97.85 279 28.57 7e-13 cd01942 ribokinase_group_A Ribokinase-like subgroup A. Found in bacteria and archaea this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time..
rpsblast_kog gnl|CDD|38219 6 404 + 399 Gaps:120 97.07 614 21.64 1e-21 KOG3009 KOG3009 KOG3009 Predicted carbohydrate kinase contains PfkB domain [General function prediction only].
rpsblast_kog gnl|CDD|38066 45 392 + 348 Gaps:71 89.39 330 24.75 3e-16 KOG2855 KOG2855 KOG2855 Ribokinase [Carbohydrate transport and metabolism].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 328 423 96 PTHR10584 none none none
PANTHER 41 294 254 PTHR10584 none none none
PANTHER 41 294 254 PTHR10584:SF165 none none none
Gene3D 339 405 67 G3DSA:3.40.1190.20 none none IPR029056
Gene3D 44 294 251 G3DSA:3.40.1190.20 none none IPR029056
SUPERFAMILY 340 391 52 SSF53613 none none IPR029056
SUPERFAMILY 44 301 258 SSF53613 none none IPR029056
Pfam 44 298 255 PF00294 none pfkB family carbohydrate kinase IPR011611
Pfam 338 390 53 PF00294 none pfkB family carbohydrate kinase IPR011611
PANTHER 328 423 96 PTHR10584:SF165 none none none
ProSitePatterns 77 101 25 PS00583 none pfkB family of carbohydrate kinases signature 1. IPR002173

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting