Protein : Qrob_P0284110.2 Q. robur
Protein Identifier  ? Qrob_P0284110.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=2) PTHR11802:SF8 - SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE D) (PLANTS) Code Enzyme  EC:3.4.16.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 390  
Kegg Orthology  K16296
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004185 serine-type carboxypeptidase activity Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103318801 1 388 + 388 Gaps:47 83.93 504 68.09 0.0 serine carboxypeptidase-like 20
blastp_kegg lcl|pper:PRUPE_ppa005545mg 19 388 + 370 Gaps:16 82.20 455 74.87 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_025173 9 388 + 380 Gaps:37 81.33 498 67.65 0.0 Serine carboxypeptidase-like 20 isoform 1
blastp_kegg lcl|vvi:100242709 3 388 + 386 Gaps:8 82.73 469 67.78 0.0 serine carboxypeptidase-like 20-like
blastp_kegg lcl|pxb:103932493 10 388 + 379 Gaps:51 83.10 503 65.55 0.0 serine carboxypeptidase-like 20
blastp_kegg lcl|vvi:100251321 5 388 + 384 Gaps:8 82.66 467 66.84 0.0 serine carboxypeptidase-like 20-like
blastp_kegg lcl|pxb:103932454 19 388 + 370 Gaps:47 82.32 492 66.91 0.0 serine carboxypeptidase-like 20
blastp_kegg lcl|mdm:103434375 5 388 + 384 Gaps:51 83.76 505 65.01 0.0 serine carboxypeptidase-like 20
blastp_kegg lcl|cic:CICLE_v10013875mg 4 388 + 385 Gaps:31 82.97 499 61.59 0.0 hypothetical protein
blastp_kegg lcl|csv:101209433 8 388 + 381 Gaps:40 82.27 502 65.62 0.0 serine carboxypeptidase 1-like
blastp_pdb 1ivy_B 27 388 + 362 Gaps:71 81.19 452 38.15 9e-55 mol:protein length:452 HUMAN PROTECTIVE PROTEIN
blastp_pdb 1ivy_A 27 388 + 362 Gaps:71 81.19 452 38.15 9e-55 mol:protein length:452 HUMAN PROTECTIVE PROTEIN
blastp_pdb 1whs_A 33 257 + 225 Gaps:14 84.31 255 46.51 2e-44 mol:protein length:255 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1wht_A 48 257 + 210 Gaps:13 78.52 256 47.76 2e-44 mol:protein length:256 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1bcs_A 33 257 + 225 Gaps:14 81.75 263 46.51 2e-44 mol:protein length:263 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1bcr_A 33 257 + 225 Gaps:14 81.75 263 46.51 2e-44 mol:protein length:263 SERINE CARBOXYPEPTIDASE II
blastp_pdb 3sc2_A 33 257 + 225 Gaps:14 83.01 259 46.51 5e-44 mol:protein length:259 SERINE CARBOXYPEPTIDASE II (CPDW-II)
blastp_pdb 1gxs_C 29 228 + 200 Gaps:13 70.74 270 43.46 1e-34 mol:protein length:270 P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A
blastp_pdb 1gxs_A 29 228 + 200 Gaps:13 70.74 270 43.46 1e-34 mol:protein length:270 P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A
blastp_pdb 1ysc_A 47 238 + 192 Gaps:19 42.52 421 44.13 3e-32 mol:protein length:421 SERINE CARBOXYPEPTIDASE
blastp_uniprot_sprot sp|Q8L7B2|SCP20_ARATH 1 388 + 388 Gaps:35 82.70 497 61.31 4e-171 Serine carboxypeptidase-like 20 OS Arabidopsis thaliana GN SCPL20 PE 2 SV 2
blastp_uniprot_sprot sp|P37890|CBP1_ORYSJ 2 388 + 387 Gaps:38 81.76 510 58.75 5e-167 Serine carboxypeptidase 1 OS Oryza sativa subsp. japonica GN CBP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LSV8|SCP21_ARATH 14 388 + 375 Gaps:38 81.58 494 60.30 8e-162 Serine carboxypeptidase-like 21 OS Arabidopsis thaliana GN SCPL21 PE 2 SV 2
blastp_uniprot_sprot sp|P07519|CBP1_HORVU 33 388 + 356 Gaps:36 76.55 499 60.99 9e-161 Serine carboxypeptidase 1 OS Hordeum vulgare GN CBP1 PE 1 SV 4
blastp_uniprot_sprot sp|Q9CAU0|SCP6_ARATH 31 388 + 358 Gaps:31 73.23 452 39.88 6e-70 Serine carboxypeptidase-like 6 OS Arabidopsis thaliana GN SCPL6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SQX6|SCP7_ARATH 5 388 + 384 Gaps:45 81.69 437 39.78 7e-70 Serine carboxypeptidase-like 7 OS Arabidopsis thaliana GN SCPL7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAU3|SCP2_ARATH 31 388 + 358 Gaps:27 75.06 441 39.88 1e-69 Serine carboxypeptidase-like 2 OS Arabidopsis thaliana GN SCPL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAU1|SCP3_ARATH 6 388 + 383 Gaps:34 81.41 441 38.16 2e-69 Serine carboxypeptidase-like 3 OS Arabidopsis thaliana GN SCPL3 PE 2 SV 1
blastp_uniprot_sprot sp|O81009|SCP12_ARATH 31 388 + 358 Gaps:39 76.55 435 40.84 2e-68 Serine carboxypeptidase-like 12 OS Arabidopsis thaliana GN SCPL12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAU2|SCP5_ARATH 23 388 + 366 Gaps:29 76.94 438 38.87 4e-68 Serine carboxypeptidase-like 5 OS Arabidopsis thaliana GN SCPL5 PE 2 SV 2

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 306 306 PTHR11802 none none IPR001563
Gene3D 29 388 360 G3DSA:3.40.50.1820 none none IPR029058
PRINTS 120 132 13 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 168 193 26 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 133 143 11 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 334 347 14 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PANTHER 323 388 66 PTHR11802:SF8 none none none
Phobius 27 389 363 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 182 189 8 PS00131 none Serine carboxypeptidases, serine active site. IPR018202
PANTHER 323 388 66 PTHR11802 none none IPR001563
Phobius 8 21 14 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 321 388 68 SSF53474 none none IPR029058
SUPERFAMILY 33 265 233 SSF53474 none none IPR029058
Phobius 22 26 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 37 250 214 PF00450 none Serine carboxypeptidase IPR001563
PANTHER 1 306 306 PTHR11802:SF8 none none none

3 Localization

Analysis Start End Length
TMHMM 7 24 17
SignalP_EUK 1 26 25
SignalP_GRAM_POSITIVE 1 26 25

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.976 0.023 NON-PLANT 26