Protein : Qrob_P0279110.2 Q. robur
Protein Identifier  ? Qrob_P0279110.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=35) PF14368 - Probable lipid transfer Gene Prediction Quality  validated
Protein length 

Sequence

Length: 162  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0010s09550g 1 159 + 159 Gaps:3 95.29 170 74.69 2e-75 POPTRDRAFT_231139 hypothetical protein
blastp_kegg lcl|pmum:103324029 1 152 + 152 Gaps:4 93.33 165 80.52 2e-74 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|pper:PRUPE_ppa012613mg 1 152 + 152 Gaps:4 95.65 161 79.87 2e-73 hypothetical protein
blastp_kegg lcl|fve:101296088 3 156 + 154 Gaps:5 94.01 167 75.80 8e-72 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|mdm:103416849 1 159 + 159 Gaps:4 96.41 167 74.53 3e-71 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|pxb:103937646 1 159 + 159 Gaps:4 96.41 167 74.53 6e-71 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|pxb:103959241 1 159 + 159 Gaps:4 96.41 167 73.91 8e-70 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|vvi:100852418 1 160 + 160 Gaps:3 96.32 163 73.25 1e-69 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|cmo:103483695 1 161 + 161 Gaps:3 97.04 169 68.29 2e-69 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|csv:101204822 1 161 + 161 Gaps:3 97.04 169 67.07 2e-68 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_uniprot_sprot sp|Q9ZQI8|NLTL2_ARATH 5 154 + 150 Gaps:14 95.86 169 29.01 5e-15 Non-specific lipid-transfer protein-like protein At2g13820 OS Arabidopsis thaliana GN At2g13820 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VYI9|NLTL5_ARATH 22 119 + 98 Gaps:4 54.95 182 34.00 2e-13 Non-specific lipid-transfer protein-like protein At5g64080 OS Arabidopsis thaliana GN At5g64080 PE 1 SV 1
blastp_uniprot_sprot sp|O64864|YLS3_ARATH 1 102 + 102 Gaps:7 52.20 205 32.71 5e-12 Protein YLS3 OS Arabidopsis thaliana GN YLS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FFY3|VAS_ARATH 1 120 + 120 Gaps:22 79.47 151 37.50 7e-09 Lipid transfer-like protein VAS OS Arabidopsis thaliana GN VAS PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZVC7|XYP11_ARATH 16 110 + 95 Gaps:4 56.25 176 32.32 6e-08 Xylogen-like protein 11 OS Arabidopsis thaliana GN XYP11 PE 1 SV 2
blastp_uniprot_sprot sp|Q9C7F7|UGPI5_ARATH 3 161 + 159 Gaps:26 95.85 193 21.62 1e-07 Uncharacterized GPI-anchored protein At1g27950 OS Arabidopsis thaliana GN At1g27950 PE 1 SV 1
blastp_uniprot_sprot sp|Q43871|NLTP8_HORVU 2 95 + 94 Gaps:9 82.61 115 33.68 3e-07 Non-specific lipid-transfer protein Cw18 OS Hordeum vulgare GN CW18 PE 1 SV 1
blastp_uniprot_sprot sp|Q41073|NLTP_PINTA 3 92 + 90 Gaps:10 76.42 123 34.04 5e-07 Non-specific lipid-transfer protein OS Pinus taeda PE 2 SV 1
blastp_uniprot_sprot sp|Q6ASY2|NLTL1_ORYSJ 22 108 + 87 Gaps:7 50.56 178 36.67 9e-07 Non-specific lipid transfer protein-like 1 OS Oryza sativa subsp. japonica GN LTPL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q43766|NLTP3_HORVU 2 101 + 100 Gaps:12 91.53 118 34.26 1e-06 Non-specific lipid-transfer protein 3 OS Hordeum vulgare GN LTP3 PE 3 SV 1
rpsblast_cdd gnl|CDD|72935 30 92 + 63 none 100.00 63 53.97 9e-14 cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI) Lipid Transfer (LT) and Seed Storage (SS) Protein family a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors lipid transfer proteins seed storage proteins and similar proteins. Proteins in this family are known to play important roles in defending plants from insects and pathogens lipid transport between intracellular membranes and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges..
rpsblast_cdd gnl|CDD|206536 5 96 + 92 Gaps:2 96.84 95 35.87 5e-11 pfam14368 LTP_2 Probable lipid transfer. The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines paired in various ways.
rpsblast_cdd gnl|CDD|201103 23 100 + 78 Gaps:4 100.00 74 33.78 6e-09 pfam00234 Tryp_alpha_amyl Protease inhibitor/seed storage/LTP family. This family is composed of trypsin-alpha amylase inhibitors seed storage proteins and lipid transfer proteins from plants.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 19 19 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 4 14 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 22 102 81 G3DSA:1.10.110.10 none none none
Phobius 15 19 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 20 161 142 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 43 57 15 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 22 38 17 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 77 94 18 PR00382 none Plant phospholipid transfer protein signature IPR000528
SMART 23 100 78 SM00499 none Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family IPR016140
Pfam 7 100 94 PF14368 none Probable lipid transfer IPR016140
SUPERFAMILY 22 101 80 SSF47699 none none IPR016140

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 19 18
SignalP_EUK 1 19 18
SignalP_GRAM_NEGATIVE 1 19 18

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 19   Secretory pathway 1 0.971 0.013 NON-PLANT 19