Protein : Qrob_P0279100.2 Q. robur
Protein Identifier  ? Qrob_P0279100.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=35) PF14368 - Probable lipid transfer Gene Prediction Quality  validated
Protein length 

Sequence

Length: 177  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_020657 1 176 + 176 Gaps:12 100.00 180 67.78 1e-68 Non-specific lipid-transfer protein putative isoform 1
blastp_kegg lcl|tcc:TCM_004321 1 169 + 169 Gaps:11 96.26 187 60.00 2e-66 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
blastp_kegg lcl|vvi:100263007 1 176 + 176 Gaps:7 100.00 181 68.51 8e-63 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|gmx:100306151 1 176 + 176 Gaps:10 100.00 186 55.91 7e-61 uncharacterized LOC100306151
blastp_kegg lcl|pop:POPTR_0010s09550g 1 172 + 172 Gaps:9 97.06 170 60.61 4e-60 POPTRDRAFT_231139 hypothetical protein
blastp_kegg lcl|fve:101296088 4 163 + 160 Gaps:7 92.81 167 65.81 4e-60 non-specific lipid-transfer protein-like protein At2g13820-like
blastp_kegg lcl|pop:POPTR_0010s09540g 1 176 + 176 Gaps:12 100.00 166 68.07 8e-58 POPTRDRAFT_769294 hypothetical protein
blastp_kegg lcl|cmo:103483695 1 171 + 171 Gaps:7 97.04 169 61.59 1e-56 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|pmum:103324029 1 174 + 174 Gaps:11 98.79 165 65.03 3e-56 non-specific lipid-transfer protein-like protein At2g13820
blastp_kegg lcl|pda:103695529 1 169 + 169 Gaps:9 97.59 166 59.26 6e-56 non-specific lipid transfer protein GPI-anchored 2-like
blastp_uniprot_sprot sp|Q9ZQI8|NLTL2_ARATH 1 169 + 169 Gaps:17 99.41 169 32.14 8e-16 Non-specific lipid-transfer protein-like protein At2g13820 OS Arabidopsis thaliana GN At2g13820 PE 1 SV 1
blastp_uniprot_sprot sp|O64864|YLS3_ARATH 9 147 + 139 Gaps:31 76.10 205 36.54 1e-15 Protein YLS3 OS Arabidopsis thaliana GN YLS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYI9|NLTL5_ARATH 28 115 + 88 Gaps:3 48.90 182 41.57 4e-14 Non-specific lipid-transfer protein-like protein At5g64080 OS Arabidopsis thaliana GN At5g64080 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C7F7|UGPI5_ARATH 3 137 + 135 Gaps:27 83.94 193 22.84 1e-08 Uncharacterized GPI-anchored protein At1g27950 OS Arabidopsis thaliana GN At1g27950 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZVC7|XYP11_ARATH 28 115 + 88 Gaps:5 51.70 176 38.46 2e-08 Xylogen-like protein 11 OS Arabidopsis thaliana GN XYP11 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FFY3|VAS_ARATH 35 114 + 80 Gaps:7 53.64 151 34.57 9e-08 Lipid transfer-like protein VAS OS Arabidopsis thaliana GN VAS PE 2 SV 1
blastp_uniprot_sprot sp|P55958|NLT21_PARJU 28 103 + 76 Gaps:12 61.65 133 30.49 6e-06 Probable non-specific lipid-transfer protein 2 OS Parietaria judaica PE 1 SV 1
rpsblast_cdd gnl|CDD|72935 35 97 + 63 none 100.00 63 55.56 3e-13 cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI) Lipid Transfer (LT) and Seed Storage (SS) Protein family a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors lipid transfer proteins seed storage proteins and similar proteins. Proteins in this family are known to play important roles in defending plants from insects and pathogens lipid transport between intracellular membranes and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges..
rpsblast_cdd gnl|CDD|201103 28 105 + 78 Gaps:4 100.00 74 39.19 1e-09 pfam00234 Tryp_alpha_amyl Protease inhibitor/seed storage/LTP family. This family is composed of trypsin-alpha amylase inhibitors seed storage proteins and lipid transfer proteins from plants.
rpsblast_cdd gnl|CDD|206536 10 105 + 96 Gaps:3 100.00 95 32.63 3e-09 pfam14368 LTP_2 Probable lipid transfer. The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines paired in various ways.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 15 105 91 PF14368 none Probable lipid transfer IPR016140
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 27 106 80 SSF47699 none none IPR016140
SMART 28 105 78 SM00499 none Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family IPR016140
PRINTS 82 99 18 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 27 43 17 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 48 62 15 PR00382 none Plant phospholipid transfer protein signature IPR000528
Phobius 20 24 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 27 106 80 G3DSA:1.10.110.10 none none none
Phobius 1 8 8 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 25 176 152 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 9 19 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 22 21
SignalP_EUK 1 24 23
SignalP_GRAM_POSITIVE 1 22 21

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Secretory pathway 1 0.938 0.102 NON-PLANT 24