Protein : Qrob_P0277750.2 Q. robur
Protein Identifier  ? Qrob_P0277750.2 Organism . Name  Quercus robur
Score  9.0 Score Type  egn
Protein Description  (M=2) PTHR12585//PTHR12585:SF24 - SCC1 / RAD21 FAMILY MEMBER // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 248  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0000228 nuclear chromosome A chromosome found in the nucleus of a eukaryotic cell.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1678520 18 242 + 225 Gaps:14 29.07 781 46.26 9e-35 Sister chromatid cohesion 1 protein putative
blastp_kegg lcl|pop:POPTR_0017s10090g 46 242 + 197 Gaps:44 22.99 770 49.72 8e-33 Sister chromatid cohesion 1 protein 2
blastp_kegg lcl|cit:102620607 47 242 + 196 Gaps:17 26.06 802 42.11 1e-32 sister chromatid cohesion 1 protein 2-like
blastp_kegg lcl|pper:PRUPE_ppa018823mg 108 242 + 135 Gaps:55 26.61 699 44.09 9e-31 hypothetical protein
blastp_kegg lcl|tcc:TCM_035789 8 242 + 235 Gaps:48 26.94 887 42.26 2e-30 Rad21/Rec8-like family protein isoform 1
blastp_kegg lcl|pmum:103330405 108 242 + 135 Gaps:53 24.03 774 43.55 3e-30 sister chromatid cohesion 1 protein 2
blastp_kegg lcl|pxb:103960912 107 242 + 136 Gaps:20 20.79 731 45.39 6e-24 sister chromatid cohesion 1 protein 2-like
blastp_kegg lcl|pxb:103959651 107 242 + 136 Gaps:20 20.79 731 44.74 5e-23 sister chromatid cohesion 1 protein 2-like
blastp_kegg lcl|mdm:103404218 107 242 + 136 Gaps:20 20.79 731 48.03 6e-23 sister chromatid cohesion 1 protein 2
blastp_kegg lcl|vvi:100257596 116 242 + 127 Gaps:4 16.27 756 51.22 9e-22 sister chromatid cohesion 1 protein 2-like
blastp_uniprot_sprot sp|Q9FQ20|SCC12_ARATH 63 242 + 180 Gaps:17 22.35 810 43.09 1e-19 Sister chromatid cohesion 1 protein 2 OS Arabidopsis thaliana GN SYN2 PE 2 SV 2

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 165 242 78 PTHR12585:SF24 none none none
Gene3D 195 242 48 G3DSA:1.10.10.580 none none IPR023093
Pfam 215 242 28 PF04824 none Conserved region of Rad21 / Rec8 like protein IPR006909
PANTHER 112 140 29 PTHR12585 none none none
PANTHER 165 242 78 PTHR12585 none none none
PANTHER 112 140 29 PTHR12585:SF24 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 14   Mitochondrion 2 0.032 0.861 NON-PLANT 14